Gene SNSL254_pSN254_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0103 
Symbol 
ID4929382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand- 
Start bp91659 
End bp92300 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content54% 
IMG OID642572402 
Producthypothetical protein 
Protein accessionYP_001101977 
Protein GI134047093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.0000143643 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.0906624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAG CACAAGTAGC ACTGGACACA AACAACGACC GCAGCAACCA CTACTCTCGC 
CCTGTTTTCA AGCAAGTTCT GAAAGTAAAC AGCCTCCAAG CTCAGCGCGT CATGGAACGC 
AGCTTTGAGC GAGTTTCCAA CTCCCTGTTC TCCATCGACG TGATCCTTCG CATCATCGGT 
GAGCAGGACG AAATCGACCA GGTTGAAACC GTCATCCTGG AACACATTTC CAAGGTCTCC 
GAAGACCTGG ACAAAGCTAC CGCCCAGCTC AACAAGCTGA TGGAAGACAA CGGCATCGAC 
ATGATGCCCG GCTACACCAA CCCGAATGAA TACACCATCG AGATCAACTC TCCTCAGGTT 
GCTCAGTTTG CACACCTGAT CCGCAAACTG GATACCCTGA TGGGGATCGT TGACACTCTC 
TGGCTGAACA CCGTACTGAC CAGCAAGCAG CGCACCGACG CCACTTACCA ATGGCAGCAA 
CGCCTCATCA AGCTGGCCGG TCGAATCATC GGCATCGAGA AACGGGCTCG CATTTCCGCC 
CACAGCAAAG GCAAAGAAGG TGAAGTGGCC GAAGCCGCTC CGGAATCTGC AACCGGCGAC 
AAGGAAATCG CAGACGAAGC CGAGAAAACA AAAGCAGCAT AA
 
Protein sequence
MAEAQVALDT NNDRSNHYSR PVFKQVLKVN SLQAQRVMER SFERVSNSLF SIDVILRIIG 
EQDEIDQVET VILEHISKVS EDLDKATAQL NKLMEDNGID MMPGYTNPNE YTIEINSPQV 
AQFAHLIRKL DTLMGIVDTL WLNTVLTSKQ RTDATYQWQQ RLIKLAGRII GIEKRARISA 
HSKGKEGEVA EAAPESATGD KEIADEAEKT KAA