Gene SNSL254_pSN254_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0033 
SymbolinsB1 
ID4929387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand
Start bp19145 
End bp19867 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content53% 
IMG OID642572337 
Producttransposase InsB1 for insertion sequence IS26 
Protein accessionYP_001101912 
Protein GI134047087 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.139125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.210279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTGATGG AGCTGCACAT GAACCCATTC AAAGGCCGGC ATTTTCAGCG TGACATCATT 
CTGTGGGCCG TACGCTGGTA CTGCAAATAC GGCATCAGTT ACCGTGAGCT GCAGGAGATG
CTGGCTGAAC GCGGAGTGAA TGTCGATCAC TCCACGATTT ACCGCTGGGT TCAGCGTTAT
GCGCCTGAAA TGGAAAAACG GCTGCGCTGG TACTGGCGTA ACCCTTCCGA TCTTTGCCCG
TGGCACATGG ATGAAACCTA CGTGAAGGTC AATGGCCGCT GGGCGTATCT GTACCGGGCC
GTCGACAGCC GGGGCCGCAC TGTCGATTTT TATCTCTCCT CCCGTCGTAA CAGCAAAGCT
GCATACCGGT TTCTGGGTAA AATCCTCAAC AACGTGAAGA AGTGGCAGAT CCCGCGATTC
ATCAACACGG ATAAAGCGCC CGCCTATGGT CGCGCGCTTG CTCTGCTCAA ACGCGAAGGC
CGGTGCCCGT CTGACGTTGA ACACCGACAG ATTAAGTACC GGAACAACGT GATTGAATGC
GATCATGGCA AACTGAAACG GATAATCGGC GCCACGCTGG GATTTAAATC CATGAAGACG
GCTTACGCCA CCATCAAAGG TATTGAGGTG ATGCGTGCAC TACGCAAAGG CCAGGCCTCA
GCATTTTATT ATGGTGATCC CCTGGGCGAA ATGCGCCTGG TAAGCAGAGT TTTTGAAATG
TAA
 
Protein sequence
MLMELHMNPF KGRHFQRDII LWAVRWYCKY GISYRELQEM LAERGVNVDH STIYRWVQRY 
APEMEKRLRW YWRNPSDLCP WHMDETYVKV NGRWAYLYRA VDSRGRTVDF YLSSRRNSKA
AYRFLGKILN NVKKWQIPRF INTDKAPAYG RALALLKREG RCPSDVEHRQ IKYRNNVIEC
DHGKLKRIIG ATLGFKSMKT AYATIKGIEV MRALRKGQAS AFYYGDPLGE MRLVSRVFEM