Gene SNSL254_pSN254_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0025 
Symbol 
ID4929372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand
Start bp15054 
End bp15404 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content50% 
IMG OID642572329 
Producthypothetical protein 
Protein accessionYP_001101904 
Protein GI134047109 
COG category[S] Function unknown 
COG ID[COG4683] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000365289 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value0.00178909 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTGGGTCA TCGAGACAAC CGACACCTTT GATGAGTGGT TCGATGCTCT GGATGATACC 
GATAGAGCAA ACGTGCTGGC TTCGATGATG GTGCTGCGAG ATAGAGGCCC CATGCTGTCG
AGGCCATACG CGGATACTGT TAACGGTTCA TCCTACAGCA ACATGAAAGA GCTTCGGGTC
CAAAGCAAAG GAGATCCTAT CAGAGCGTTC TTTGCGTTCG ATCCAAAGCG TAAGGGGATT
CTTCTCTGCG CCGGTAACAA GACCGGGGAC GAGAAAAGGT TTTATGAAGT AATGATCCCA
ATTGCAGACC GTGAGTTTGC GGCGCACTTG GATAAATTGA AGAAGGAGTG A
 
Protein sequence
MWVIETTDTF DEWFDALDDT DRANVLASMM VLRDRGPMLS RPYADTVNGS SYSNMKELRV 
QSKGDPIRAF FAFDPKRKGI LLCAGNKTGD EKRFYEVMIP IADREFAAHL DKLKKE