Gene SNSL254_A4953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4953 
Symbol 
ID6486049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4823058 
End bp4823603 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content50% 
IMG OID642740163 
Productputative fimbrial chaperone 
Protein accessionYP_002043837 
Protein GI194446625 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3539] P pilus assembly protein, pilin FimA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.783579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAATA AGAAAATTAT CATCCTGGCA ATGTTAACTG CCGTAGCATC CACACCGGTA 
TTTGCCCAGA ACACGATTAC GTTCAATGGC AAAATTTACG ATCAGGCGTG TACGGTTCAG
GTGAATGGCT CCACGGATAC CACCATTGAT TTGGGTAATT ACAGCAAAGA ACGCATCGCG
GAAAAAGGCG CCACAACCGA TTACGTGCCG TTTACCGTAA GCCTGGTTAG CTGCCCGGAA
GCAGGGACTG GCGTACCAAC CCAAGCCATG TTCCGCTTCC ACGGCGCAAC AGATGATTCT
AACCCAACGT ACTTCAAAAA CGCGGACGAA GGATCGGAAA CGGGCGCCGC GGGTGTCGGT
ATTTCTATTC AGAACGCTTC ACATAGCGAT GTGACAGATA ACACGGATGA TGCCGCAGTA
AACCTGCCAA CCGACGGCTC GACAGCAGAC TTTACCTATT ACGCCGCCAT GGCAAACGAT
GGTTCCGCAA CCGTAACCGG TGGAGATGTT AGCACTCAGG TTACGTATAC CGTTTCGTAT
CAGTAA
 
Protein sequence
MFNKKIIILA MLTAVASTPV FAQNTITFNG KIYDQACTVQ VNGSTDTTID LGNYSKERIA 
EKGATTDYVP FTVSLVSCPE AGTGVPTQAM FRFHGATDDS NPTYFKNADE GSETGAAGVG
ISIQNASHSD VTDNTDDAAV NLPTDGSTAD FTYYAAMAND GSATVTGGDV STQVTYTVSY
Q