| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4940 |
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| Symbol | |
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| ID | 6484105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4809244 |
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| End bp | 4811181 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642740150 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_002043824 |
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| Protein GI | 194443158 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.183926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 103 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAGAG CCAAACCATT TGTCTGGCGT CTCGTCGCCG CCAGCGTATG CCTGCTGACC
TTTTGTCACC TCGCGCGGGC CGACTCACTG GAAGAGCAGC GTAACCGCTA TGCGCAGATT
AAGCAGGCCT GGGACAACCG CCAGATGGAT GTGGTAGAGC AGATGATGCC GGGTCTGAAA
GATTATCCGC TCTACCCGTA TCTGGAATAC CGTAAGATCA CCGACGATTT GATGAACCAA
CCGGCGATTG CCGTCACGCA GTTTGTGCGC GCCAATCCTA CGCTTCCGCC TGCGCGTACG
CTGCAATCAC GCTTCGTCAA TGAGCTGGCG CGTCGTGAAG ACTGGCGCGG CTTGCTGGCG
TTTAGCCCGG AGAAACCCGG CACCACGGAA GCGCAATGTA ACTATTACTA CGCGAAATGG
AGTACCGGGC AAACGGAAGC GGCCTGGCAG GGCGCGAAAG ACCTTTGGCT GACCGGCAAA
AGTCAGCCGA ATGCCTGCGA TAAACTGTTC AGCGTCTGGC GGGCCTCCGG CAAGCAAGAC
CCGCTGGCGT ATCTGGAACG TATTCGGCTG GCGATGAAAG CCGGAAATAC GGGGCTGGTT
ACGGTGCTGG CCGGACAGAT GCCGGCGGAA TATCAAACGA TCGCCTCAGC GATCATTACC
CTGGCTAATG ACCCTAATAA CGTGTTGACC TTCGCACGCA CCACCGGCGC CACCGATTTT
ACCCGCCAGA TGGCGGAAGT CGCGTTTGCC AGCGTCGCCC GCCAGGACGC GGAAAATGCA
CGTCTGATGA TCCCCTCGCT GGTACAGGCG CAGAAACTTA ATGAGGAACA AACGCAGGCG
CTGCGCGATA TCGTTGCCTG GCGACTGATG GGCAACGATG TGACCGATGC GCAGGCGAAA
TGGCGCGATG ACGCGATTAT GCGCTCGCAA TCGACGTCGC TTATCGAACG GCGCGTGCGC
ATGGCGCTGG GGATGGGCGA TCGTCGCGGT CTCAATACCT GGCTTGCCCG ACTGCCAATG
GAGGCGAAAG AGAAAGACGA GTGGCGTTAC TGGCAGGCGG ATTTATTGCT GGAACGCGGT
CGTGACGCCG AAGCGAAAGA GATCCTTCAT GCTTTAATGC AGAAGCGCGG TTTTTATCCG
ATGGTCGCGG CGCAGCGTTT AGGCGAAGAG TACACGCTTA AAATTGATAA AGCGCCCGCC
AACGTAAACA GCGCGTTGAC GCAGGGGCCG GAGATGGCAC GTGTACGGGA GCTGATGTAC
TGGAACCTGG ATAACACGGC GCGCAGCGAA TGGGCGAATC TGGTAAAAAG CCGTAGTAAA
TCTGAACAGG CGCAGCTGGC GCGCTATGCG TTTAACCAGC ACTGGTGGGA TCTGAGCGTA
CAGGCGACGA TCGCCGGAAA ACTGTGGGAT CATCTGGAGG AGCGTTTCCC GCTGGCGTAT
AACGATCTTT TTACCCGCTA TACCCGCGGA AAAGATATCT CACAAAGCTA TGCCATGGCG
ATTGCCCGCC AGGAGAGCGC CTGGAACCCG AAAGTAAAAT CGCCGGTAGG GGCCAGCGGC
TTAATGCAGA TTATGCCGGG AACGGCCACC CATACGGTGA AAATGTTTTC GATTCCGGAC
TACCGCGGCC CCGGCCAACT GCTGGAGCCG GAGACCAACA TCAACATTGG CACCAGCTAT
TTGCAGTATG TCTATCAGCA GTTTGGTAAT AACCGTATTT TCGCCTCGGC GGCGTATAAC
GCCGGGCCGG GGCGCGTGCG CACCTGGCTT GGCAATAGCG CCGGGCGTAT CGATGCCGTA
GCGTTTGTCG AAAGCATTCC CTTTTCGGAA ACGCGCGGCT ACGTGAAAAA CGTTCTGGCC
TATGACGCTT ACTATCGCCA CTTTATGGGG CAGAAAGAGG CCTTAATGAG CGACTCTGAG
TGGCAGCAAC GGTATTAA
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| Protein sequence | MDRAKPFVWR LVAASVCLLT FCHLARADSL EEQRNRYAQI KQAWDNRQMD VVEQMMPGLK
DYPLYPYLEY RKITDDLMNQ PAIAVTQFVR ANPTLPPART LQSRFVNELA RREDWRGLLA
FSPEKPGTTE AQCNYYYAKW STGQTEAAWQ GAKDLWLTGK SQPNACDKLF SVWRASGKQD
PLAYLERIRL AMKAGNTGLV TVLAGQMPAE YQTIASAIIT LANDPNNVLT FARTTGATDF
TRQMAEVAFA SVARQDAENA RLMIPSLVQA QKLNEEQTQA LRDIVAWRLM GNDVTDAQAK
WRDDAIMRSQ STSLIERRVR MALGMGDRRG LNTWLARLPM EAKEKDEWRY WQADLLLERG
RDAEAKEILH ALMQKRGFYP MVAAQRLGEE YTLKIDKAPA NVNSALTQGP EMARVRELMY
WNLDNTARSE WANLVKSRSK SEQAQLARYA FNQHWWDLSV QATIAGKLWD HLEERFPLAY
NDLFTRYTRG KDISQSYAMA IARQESAWNP KVKSPVGASG LMQIMPGTAT HTVKMFSIPD
YRGPGQLLEP ETNINIGTSY LQYVYQQFGN NRIFASAAYN AGPGRVRTWL GNSAGRIDAV
AFVESIPFSE TRGYVKNVLA YDAYYRHFMG QKEALMSDSE WQQRY
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