Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4893 |
Symbol | |
ID | 6485839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4766825 |
End bp | 4767673 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642740104 |
Product | fructose permease iid component |
Protein accession | YP_002043781 |
Protein GI | 194444555 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID |
TIGRFAM ID | [TIGR00828] PTS system, mannose/fructose/sorbose family, IID component |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGA AGATGATTTC TGATAAAGAC CGCCAGCAGG CGGAAACCAC TGGTCTGGTC ACCGCGCGTG ATTTACGCCG CGTCTTCTGG CGGTCATTCC AGATGGAGTT TTCCTGGAAC TATGAACGAC AAATGAACCT GGCGTTCGTC TATACGCTCA TTCCGGTATT AAAGAAACTG TATAGCCGAA AAGAAGATCT TGCCGAAGCG CTAAAACGCC ATCTGGCTTT CTTTAATACC ACGCCGCACA TTGTGACGTT GATCCTCGGT ATTACCGTGG CGATGGAGGA GAAAAATAGC CAGCAGAAAG AGATGGACGC CAGTTCTATC GATAACGTCA AAGCGTCGTT AATGGGGCCG CTGGCGGGTA TTGGCGACTC TTTTTTCTGG GGAACATTGC GTCTTATCGC CACTGGCATC GGTACCAGTC TGGCGCTGAA AGGCAATATT CTGGGGCCGA TTTTATTTCT GCTGGTGTTT AACGTACCGC ATATTCTGGC CCGCTGGTTC TTTACCCGCT GGGGCTATGT GCTGGGAACC GGCGTACTGC AACGCATTCA GCAAAGCGGA ATGATGGAAA GCCTAACCTA TGGCGCCTCG ATTATCGGTC TGATGGTGGT TGGCGCGATG ACGGCCTCCA TGATTGATAT CACCATTCCC ATTACGTTTG GTACGGGAGA GGCGAAAACC CATGTTCAGG ACATTATTAA CGACATCATG CCTTGTCTGC TGCCGTTAAT TAGCTTCGCC ATTGTGTACT GGCTGTTAGG GAAAAAAGTG AAACCGTTAA CCATCATTGG CGGTATAGCG CTGGTGGGAA TTTTCGGTTC CTGGATAGGG TTATTTTAA
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Protein sequence | MTMKMISDKD RQQAETTGLV TARDLRRVFW RSFQMEFSWN YERQMNLAFV YTLIPVLKKL YSRKEDLAEA LKRHLAFFNT TPHIVTLILG ITVAMEEKNS QQKEMDASSI DNVKASLMGP LAGIGDSFFW GTLRLIATGI GTSLALKGNI LGPILFLLVF NVPHILARWF FTRWGYVLGT GVLQRIQQSG MMESLTYGAS IIGLMVVGAM TASMIDITIP ITFGTGEAKT HVQDIINDIM PCLLPLISFA IVYWLLGKKV KPLTIIGGIA LVGIFGSWIG LF
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