Gene SNSL254_A4891 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4891 
Symbol 
ID6482866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4765581 
End bp4766042 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content46% 
IMG OID642740102 
ProductPTS system transporter subunit IIB 
Protein accessionYP_002043779 
Protein GI194446598 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3444] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGTTT TTTTACGGGT GGATCATCGT TTATTACATG GACAGGTCGC CTTTTCCTGG 
ACGCAGTACG TTGGCGCCGA CTGTATTTTA ATTGCCAACG ACAGCGTACC TAATGATGAC
CTGCGTAAAA CCACCATTAA GATGGCGAAG CCGCCCGCGG TGAAGCTGGT TATTAAAAAT
ATTGCCGATT CAATTGAAGC GATAAAAAGC GGCGTTACCG ATAAATATAA ACTTTTTATT
GTTGTTGAAT CCGTGGCGGA TGCGTACCGG CTGGCGCGCG AATTACCCGA CATTAAAAGC
ATTAATTTAG GCGGCACGAA GGTACGTGAA GGGAGCCAGA ATATTGCTAA AGCCATCAAT
CTGTTAGCGG ATGAAATGAC TCAACTTCGG GAGCTGGCGG CTGGCGGAGT AGAGATAGAA
ATTCGGCTGG TGCCTAACGA TCGTAAACAA CTTTTTGCCT GA
 
Protein sequence
MIVFLRVDHR LLHGQVAFSW TQYVGADCIL IANDSVPNDD LRKTTIKMAK PPAVKLVIKN 
IADSIEAIKS GVTDKYKLFI VVESVADAYR LARELPDIKS INLGGTKVRE GSQNIAKAIN
LLADEMTQLR ELAAGGVEIE IRLVPNDRKQ LFA