Gene SNSL254_A4823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4823 
Symbol 
ID6486163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp4694220 
End bp4695407 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content44% 
IMG OID642740036 
Productinner membrane protein YjgN 
Protein accessionYP_002043714 
Protein GI194442394 
COG category[S] Function unknown 
COG ID[COG4269] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACG TTATCAGTAG TAAAGATAAC CATAATCACA CGTTGGTGTT TACAGGCAAG 
GGCGGAAAGT ATTTTGTTAT TTGCCTTGTG AATTTCTTGT TGACGTGTAT CACGTTGGGA 
ATCTATGCGC CGTGGGCGAT GGTGAAATGT CGACGTTATA TTTATACTAA TATGACGCTA 
AACAATCAGC CTTTTGCTTA CAAAGCCACG GGCGGCGCAT TATTTATTAG TGTGTTGTTA 
GTTTTTATTA TTTATATTGT TAGCTTCTCT CTTATTGAAC ACGGTCATCC CGGTCTCGGT 
TTTACGCTAT TCGGCTTATT AATTGCGATT ATTCCTTTTA TGGCGGTGAA AGGATTACAG 
TATCAGGCGA TGATGACTTC GCTTAATGGC GTACATTTTG GATTCCAGTG TTCCATGCGG 
CGCGCCTGGT GGTACATGTT CGCTCTCCCG GTACTCCTGA TGGTGGCGCT TTATATTGTT 
CTTTACATTA TCTCACTGGT AACCATCGCC GTCGGCGGTT TAGTGTTCAA TATCGTTTTT 
CTCGGTTTGC TGGCTATTAT TGGGATAGGG GTCATTAACG GTATTACCTA CAGCAAATGG 
ATGACCTTGT TTGGCAATGG CGCAAACTTT GGCATTCATC GTTTCTCGAT TCAGGTTAAT 
GTTAAAACGT GCATCAGAGG GTGCGTGTTG GCAATGTTGA CCCTTTTCCC TTTTGCTGTC 
GTGATTGGTT ATCTAATCGC GCCGGTGTTC ACCGACATGA TTCTTTTGAG TATGATGGGG 
AATGCGCAGG CAGGAGGGGC GCTTATTCTG CAATATTATG GCCAGATAAT GGCATGTTAT 
TTCCTCTATT TTCTCGCGAT TATTGTGGTA ACCAGTTACT TATATGTGGC GTTACGCAAC 
CTGTTTTTAA ACAATTTGTC ACTGGCGAAC GATTCGATTC GTTTTCATTC CTCTGTCACT 
GCACACGGTA TGCTGTGGCG GTTACTGGTG GTGTTTGTGA TTTCCGGCGT GACCTTAGGG 
CTGGCTTATC CGTGGTTGAA AATTTGGCTG GTGAGCTGGC TGGCGCAGAA TACACAGGTC 
CAGGGCGATC TGGATTCGCT TGAGTTAACC AATGATGAGA AGCCGCTGGA AAACAGCCTG 
CTAATGTGGA TTTCTCGTGG CATCATGCCT TACTTCCCGT TTATCTGA
 
Protein sequence
MNNVISSKDN HNHTLVFTGK GGKYFVICLV NFLLTCITLG IYAPWAMVKC RRYIYTNMTL 
NNQPFAYKAT GGALFISVLL VFIIYIVSFS LIEHGHPGLG FTLFGLLIAI IPFMAVKGLQ 
YQAMMTSLNG VHFGFQCSMR RAWWYMFALP VLLMVALYIV LYIISLVTIA VGGLVFNIVF 
LGLLAIIGIG VINGITYSKW MTLFGNGANF GIHRFSIQVN VKTCIRGCVL AMLTLFPFAV 
VIGYLIAPVF TDMILLSMMG NAQAGGALIL QYYGQIMACY FLYFLAIIVV TSYLYVALRN 
LFLNNLSLAN DSIRFHSSVT AHGMLWRLLV VFVISGVTLG LAYPWLKIWL VSWLAQNTQV 
QGDLDSLELT NDEKPLENSL LMWISRGIMP YFPFI