Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4756 |
Symbol | |
ID | 6482306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4632254 |
End bp | 4632889 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642739971 |
Product | opacity-associated protein A |
Protein accession | YP_002043649 |
Protein GI | 194445543 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3061] Cell envelope opacity-associated protein A |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000275862 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 102 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGGC GCTTTGAATT AAAACCAACC CTGGCGAAAA TCTGGCACGC GCCGGATAAT TTTCGCATCA TGGAGCCGCT GCCGCCTATG CATCGTCGTG GCATTATCAT TGCCGCTATC GTGCTGGTGA TCGGTTTCCT GCTGCCCGCC AGCGAGACCA GCGACTCGCC TGTCGTTACG CGGGAAGCGC AATTGGATCT GCAATCGCAA TCACAGCCGC CGACGGAGGC CCAGCTTCAG GCGCAGCTGG TCGCGCCGCA AAACGATCCG GATCAGGTGG CGCCCGTTGC GCCGGAACCT ATCCAGGAAG GCCAGCCGGA AGAACAAAAC CAGCCGCAGA CGCAGCCTTT CCAGCAGGAT AGCGGCATCG GTCAACAGTG GCGCTCGTAC CGGGTAGAGT CTGGTAAAAC TCTGGCGCAA CTGTTCCGTG ACCACGGGCT GCCCCCGACA GACGTTTATG CAATGGCGCA GGTAGAAGGC GCTGGCAAAC CGCTGAGTAA TCTCAAAAAT GGTCAAATGA TTAAAATTCG CCAGAATGCC AGCGGGGTGG TGACAGGTTT AACGATAGAT GGCGATAACG GTCAACAGGT GCTGTTTACG CGTCAGCCTG ACGGCAGTTT TATTCGCGCA CAGTAA
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Protein sequence | MPGRFELKPT LAKIWHAPDN FRIMEPLPPM HRRGIIIAAI VLVIGFLLPA SETSDSPVVT REAQLDLQSQ SQPPTEAQLQ AQLVAPQNDP DQVAPVAPEP IQEGQPEEQN QPQTQPFQQD SGIGQQWRSY RVESGKTLAQ LFRDHGLPPT DVYAMAQVEG AGKPLSNLKN GQMIKIRQNA SGVVTGLTID GDNGQQVLFT RQPDGSFIRA Q
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