| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4738 |
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| Symbol | |
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| ID | 6483552 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4618791 |
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| End bp | 4620413 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642739953 |
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| Product | isovaleryl CoA dehydrogenase |
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| Protein accession | YP_002043631 |
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| Protein GI | 194442803 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.11297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTGGC AAACACATAC CGTTTTTAAT CAACCAGCTC CGCTCAATAA CAGTAACTTA
TTCCTGTCTG ATGGCGCGCT GTGTGAAGCG GTTTCCCGGG AAGGCGCGGG ATGGGATAGC
GATCTTCTCG CCAGCATTGG CCAACAACTG GGAACGGCGG AATCACTGGA ACTGGGGCGT
CTGGCGAACG CGCATCCTCC TGAGTTGCTA CGTTACGATC CCCAGGGACA GCGTCTGGAT
GACGTTCGCT TTCATCCCGC CTGGCACCTG TTGATGCAGG GGCTTTGCGC TAATCGGGTA
CATAACCTGG CCTGGGAGGA GGAGGCAAGG GCGGGAAGTT TTGTCGCCCG GGCGGCGCGT
TTTGTATTAC ATGCTCAGGT AGAAGCGGGA ACACTCTGTC CTGTCACGAT GACCTTTGCC
GCGACACCGT TGCTATTGCA GATGCTTCCC GCCACTTTCC ATGACTGGCT GGCGCCGCTG
CGCAGCGATC GCTACGATTC GCATTTGCTG CCGGGCGGCC AAAAGCGGGG TCTGCTCATC
GGCATGGGAA TGACGGAAAA GCAGGGCGGA TCTGACGTAC TCAGTAATAC GACCCACGCG
GAGCGGCTGG CGGATGATTC ATATCGGCTG GTGGGACATA AATGGTTTTT CTCTGTGCCG
CAAAGTGATG CGCACCTCGT GTTGGCGCAG GCAAAAGGAG GACTATCCTG TTTCTTTGTG
CCGCGTTTCC TGCCAGACGG GCAACGGAAC TCTGTTCGTC TTGAACGCCT GAAAGATAAA
CTCGGTAATC GATCTAATGC CAGCGCCGAA GTCGAGTTTC AGGATGCCGT CGGCTGGCGG
CTGGGAGAAG AGGGCGAAGG GATTCGGCAT GTCTTAAAGA TGGGCGGTAT GACGCGTCTT
GACTGCGCGC TCGGGAGTCA TGGCTTAATG CGGCGCGCAT TTTCAGTCGC CATTTACCAT
GCTCATCAGC GTCAGGCTTT TGGTAAGCCG CTGATCGAAC AACCGTTGAT GCGACAAACC
TTAAGTCGTA TGGCGCTATG CCTGGAAGGG CAGACAGCGC TTTTGTTTCG GCTGGCGCGC
GCCTGGGAGC AACGTCGCGA GGCGAAAGAG GCATTATGGG CGCGATTATT CACGCCAGCG
GCGAAATTCG CCATCTGTAA GCAGGGAATC CCTTTTGTGG CTGAGGCGAT GGAGGTTCTC
GGCGGGATGG GGTATTGCGA AGAGAGCGAA CTCCCGCGCC TGTACCGTGA AATGCCGGTG
AACAGTATCT GGGAAGGTTC CGGCAATATC ATGTGTCTGG ATGTACTGCG GGTGCTGACA
AAACAACACG GCGTCTATGA CGTATTGAGT GAAGCTTTTG CGGAAGTCAA AGGTCAGGAT
CGCCATTACG ACCGCGCGGT ACGTCAGCTA CAGCAACGTT TACGCAAACC GGACGAAGCA
ATGGGCAGAG AGATTACGCA GCAGCTTTTC TTGCTGGGGT GCGGAGCGGA AATGCTGCGT
CATGCCTCGC CGCCGCTGGC GCAAGCGTGG TGTCAGATGA TGCTGGATAC ACGCGGCGAA
ATGCCGCTGC CTGCCCAGGT GCAAAATGAT TTACTGTTAA GGGCGACCGG GGGACTGCGG
TAA
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| Protein sequence | MSWQTHTVFN QPAPLNNSNL FLSDGALCEA VSREGAGWDS DLLASIGQQL GTAESLELGR
LANAHPPELL RYDPQGQRLD DVRFHPAWHL LMQGLCANRV HNLAWEEEAR AGSFVARAAR
FVLHAQVEAG TLCPVTMTFA ATPLLLQMLP ATFHDWLAPL RSDRYDSHLL PGGQKRGLLI
GMGMTEKQGG SDVLSNTTHA ERLADDSYRL VGHKWFFSVP QSDAHLVLAQ AKGGLSCFFV
PRFLPDGQRN SVRLERLKDK LGNRSNASAE VEFQDAVGWR LGEEGEGIRH VLKMGGMTRL
DCALGSHGLM RRAFSVAIYH AHQRQAFGKP LIEQPLMRQT LSRMALCLEG QTALLFRLAR
AWEQRREAKE ALWARLFTPA AKFAICKQGI PFVAEAMEVL GGMGYCEESE LPRLYREMPV
NSIWEGSGNI MCLDVLRVLT KQHGVYDVLS EAFAEVKGQD RHYDRAVRQL QQRLRKPDEA
MGREITQQLF LLGCGAEMLR HASPPLAQAW CQMMLDTRGE MPLPAQVQND LLLRATGGLR
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