Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4722 |
Symbol | hfq |
ID | 6483708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4603752 |
End bp | 4604060 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642739938 |
Product | RNA-binding protein Hfq |
Protein accession | YP_002043616 |
Protein GI | 194445156 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAAGG GGCAATCTTT ACAAGATCCG TTCCTGAACG CATTGCGTCG GGAACGTGTT CCAGTTTCTA TTTATTTGGT GAATGGTATT AAGCTGCAAG GTCAAATCGA GTCCTTTGAT CAGTTCGTGA TCCTGTTGAA GAACACGGTC AGCCAGATGG TTTATAAGCA CGCGATTTCT ACTGTTGTCC CGTCTCGCCC GGTTTCCCAT CACAGCAACA ATGCCGGTGG CGGCGCCAGC AATAACTACC ATCACGGTAG CAACGCGCAG GGTTCTACTG CGCAACAGGA CAGCGAAGAG ACTGAATAA
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Protein sequence | MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQIESFD QFVILLKNTV SQMVYKHAIS TVVPSRPVSH HSNNAGGGAS NNYHHGSNAQ GSTAQQDSEE TE
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