| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4721 |
|---|
| Symbol | miaA |
|---|
| ID | 6485436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 4602719 |
|---|
| End bp | 4603669 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642739937 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_002043615 |
|---|
| Protein GI | 194443718 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 89 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATG TAAGCAAGGC GAGCCTGCCT AAGGCGATAT TTTTGATGGG GCCGACGGCC
TCCGGCAAAA CGGCGCTGGC GATAGAACTG CGTAAAGTTT TGCCAGTAGA GTTGATAAGC
GTTGATTCCG CCCTCATTTA TCGGGGAATG GATATTGGCA CGGCTAAGCC GAATGCCGAT
GAGCTGAAAG CGGCGCCGCA TCGACTGCTG GATATACGCG ACCCGTCGCA GGCGTATTCG
GCGGCGGATT TTCGCCGCGA CGCGTTAGAG CAAATGGCGG AGATCACCGC TGCGGGGCGT
ATCCCGCTGT TAGTGGGCGG TACCATGCTG TATTTTAAGG CATTGCTGGA AGGGTTATCG
CCGCTGCCTT CAGCAGATCC GGAAGTCAGA TCCCGGATAG AGCAGCAAGC AGCGGAGCTT
GGATGGGAGG CGTTGCATCA GCAACTTCAG GAGATAGATC CGGTTGCCGC CGCGCGAATT
CATCCAAATG ATCCGCAAAG ACTTTCCCGG GCACTGGAAG TTTTTTTCAT TTCGGGTAAA
ACTTTAACGG AGCTAACGCA AACGTCAGGA GACGCGCTAC CGTACCAGGT GCATCAGTTC
GCTATCGCCC CGGCGAGCCG TGAACTGCTC CATCAGCGCA TTGAACTGCG TTTTCATCAG
ATGTTGGCTT CAGGTTTTGA AGCAGAAGTC CGGGCGCTTT TTGCCCGAGG AGATTTGCAT
ACGGACTTGC CTTCCATCCG TTGTGTGGGA TACCGCCAGA TGTGGTCATA CATTGAGGGC
GAAATCTCAT ATGATGAAAT GGTTTATAGA GGTGTTTGCG CCACGAGACA GTTGGCGAAG
CGCCAGATGA CCTGGTTGCG CGGTTGGGAA GGGGTGCGCT GGCTTGACAG TGAGAATCCC
GATCGGGCGC GAAAAGAAGT ATTACAGGTT GTTGGTGCTA TCGCAGACTG A
|
|---|
| Protein sequence | MNDVSKASLP KAIFLMGPTA SGKTALAIEL RKVLPVELIS VDSALIYRGM DIGTAKPNAD
ELKAAPHRLL DIRDPSQAYS AADFRRDALE QMAEITAAGR IPLLVGGTML YFKALLEGLS
PLPSADPEVR SRIEQQAAEL GWEALHQQLQ EIDPVAAARI HPNDPQRLSR ALEVFFISGK
TLTELTQTSG DALPYQVHQF AIAPASRELL HQRIELRFHQ MLASGFEAEV RALFARGDLH
TDLPSIRCVG YRQMWSYIEG EISYDEMVYR GVCATRQLAK RQMTWLRGWE GVRWLDSENP
DRARKEVLQV VGAIAD
|
|---|
| |