Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4649 |
Symbol | |
ID | 6485921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4540278 |
End bp | 4540997 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642739871 |
Product | DNA-binding transcriptional activator DcuR |
Protein accession | YP_002043553 |
Protein GI | 194444137 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG4565] Response regulator of citrate/malate metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.420528 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 0.899721 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAATG TATTAATTGT CGATGACGAT GCGATGGTCG CGGAGTTAAA TCGCCGCTAT GTCGCGCAAA TCTCCGGTTT TCATTGTTGT GGAACCGCTT CGACGCTGGA AAAAGCGAAA GAGTTTATCT TCAACAGTGA AAATCACATT GACCTAATCC TGCTGGATAT CTACATGCAG CAGGAAAACG GATTGGATCT GCTGCCTGTC CTGCACAGCG CAGGCTGCAA AAGCGACGTT ATTGTCATTT CTTCTGCCGC TGACGCCGCC ACCATTAAAG ATTCGCTTCA CTACGGCGTG GTGGATTATC TGATCAAGCC TTTTCAGGCC ACGCGCTTTG AAGAAGCGTT GACCGGCTGG CTACGTAAGA AAACGGCGAT GGAAAAACGC CAGTATTACG AACAGTCTGA GCTTGACCTG CTCATTCACG GTAATTCATC CAGCGAGCAG GAGCCTCGTC GGCTGCCAAA AGGGCTGACC CAGCAAACGC TACGCACCTT ATGCCAGTGG ATTGATGCGC ATCAGGAGCA GGAATTTTCT ACCGACGAGT TGGCCAACGA AGTGAATATC TCACGCGTCT CCTGCCGTAA ATATCTCATC TGGCTGGTAA ATTGCCATAT CTTGTTTACC AGTATTCATT ACGGCGTGAC CGGCAGGCCG GTTTACCGCT ACCGCGTTCA GCCGGAACAT TACTCTTTAC TGAAACAATA TTGTCAGTAA
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Protein sequence | MINVLIVDDD AMVAELNRRY VAQISGFHCC GTASTLEKAK EFIFNSENHI DLILLDIYMQ QENGLDLLPV LHSAGCKSDV IVISSAADAA TIKDSLHYGV VDYLIKPFQA TRFEEALTGW LRKKTAMEKR QYYEQSELDL LIHGNSSSEQ EPRRLPKGLT QQTLRTLCQW IDAHQEQEFS TDELANEVNI SRVSCRKYLI WLVNCHILFT SIHYGVTGRP VYRYRVQPEH YSLLKQYCQ
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