Gene SNSL254_A4641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4641 
Symbol 
ID6482589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4528739 
End bp4529500 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content43% 
IMG OID642739863 
Productporin thermoregulatory protein EnvY 
Protein accessionYP_002043545 
Protein GI194443883 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.841286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATTT GCAGCAACGA ACCTTGCATA GTGTTATTAA CCGAAAAAGA TACATGGTTA 
CGAGTAAATG GTAAGGAGCC AATCAGCTTA AAAGCGAATC ATATGGCCAT TCTGGCTTGT
GAAAATAACG TTATTGACAT TTCATCATTA AATAGCGTGC TAGTAATACA AGTGAGTCGC
AATAATATTA AAGACTATTT ACAATTCCTG AATAAAGATC TCTCACACCT TCCCGTCTGG
CAACGCAACG CCGATCCCTT ATTGACCGCC AACTGTCTGA CGCCGGATAT CTTCAGGGTC
GCCGCCCGCT ACAGCGCGAT GGAAACACCG GATGAAATTG TTAGTGAACG TACCCGTGCG
CTCCTTTTCA CCGTTTTATC CCGCTTTCTT GACCACAAAA AATTTATTTC TTTGTTAATG
CACATGCTAC GCAGCCGCAT CAGTGACAGC GTTTACCACA TCATTCAGAG CGATATTCAT
AAAGACTGGA ATCTGAGCGC CGTTGCCAGC TGCCTGTGCC TGAGTCCAAG CTTGTTAAAG
AAAAAGCTCA AAAACGAGAA TACCAGTTAT AGCCAAATAA TCACGACCTG CCGAATGCGT
TATGCCGTAA ACCAATTATT AATGGACGGA AAGAATATCT CTCAAGTCTC ACAGCTGTGT
GGGTATAACA GCACATCATA CTTTATTTCC GTGTTTAAAG AGTTTTATGG TATGACCCCC
CTGCATTATG TTAGCCAACA TCGGGAACGA TCGGCTGCCT AA
 
Protein sequence
MRICSNEPCI VLLTEKDTWL RVNGKEPISL KANHMAILAC ENNVIDISSL NSVLVIQVSR 
NNIKDYLQFL NKDLSHLPVW QRNADPLLTA NCLTPDIFRV AARYSAMETP DEIVSERTRA
LLFTVLSRFL DHKKFISLLM HMLRSRISDS VYHIIQSDIH KDWNLSAVAS CLCLSPSLLK
KKLKNENTSY SQIITTCRMR YAVNQLLMDG KNISQVSQLC GYNSTSYFIS VFKEFYGMTP
LHYVSQHRER SAA