Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4641 |
Symbol | |
ID | 6482589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4528739 |
End bp | 4529500 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642739863 |
Product | porin thermoregulatory protein EnvY |
Protein accession | YP_002043545 |
Protein GI | 194443883 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.841286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGATTT GCAGCAACGA ACCTTGCATA GTGTTATTAA CCGAAAAAGA TACATGGTTA CGAGTAAATG GTAAGGAGCC AATCAGCTTA AAAGCGAATC ATATGGCCAT TCTGGCTTGT GAAAATAACG TTATTGACAT TTCATCATTA AATAGCGTGC TAGTAATACA AGTGAGTCGC AATAATATTA AAGACTATTT ACAATTCCTG AATAAAGATC TCTCACACCT TCCCGTCTGG CAACGCAACG CCGATCCCTT ATTGACCGCC AACTGTCTGA CGCCGGATAT CTTCAGGGTC GCCGCCCGCT ACAGCGCGAT GGAAACACCG GATGAAATTG TTAGTGAACG TACCCGTGCG CTCCTTTTCA CCGTTTTATC CCGCTTTCTT GACCACAAAA AATTTATTTC TTTGTTAATG CACATGCTAC GCAGCCGCAT CAGTGACAGC GTTTACCACA TCATTCAGAG CGATATTCAT AAAGACTGGA ATCTGAGCGC CGTTGCCAGC TGCCTGTGCC TGAGTCCAAG CTTGTTAAAG AAAAAGCTCA AAAACGAGAA TACCAGTTAT AGCCAAATAA TCACGACCTG CCGAATGCGT TATGCCGTAA ACCAATTATT AATGGACGGA AAGAATATCT CTCAAGTCTC ACAGCTGTGT GGGTATAACA GCACATCATA CTTTATTTCC GTGTTTAAAG AGTTTTATGG TATGACCCCC CTGCATTATG TTAGCCAACA TCGGGAACGA TCGGCTGCCT AA
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Protein sequence | MRICSNEPCI VLLTEKDTWL RVNGKEPISL KANHMAILAC ENNVIDISSL NSVLVIQVSR NNIKDYLQFL NKDLSHLPVW QRNADPLLTA NCLTPDIFRV AARYSAMETP DEIVSERTRA LLFTVLSRFL DHKKFISLLM HMLRSRISDS VYHIIQSDIH KDWNLSAVAS CLCLSPSLLK KKLKNENTSY SQIITTCRMR YAVNQLLMDG KNISQVSQLC GYNSTSYFIS VFKEFYGMTP LHYVSQHRER SAA
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