Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4619 |
Symbol | actP |
ID | 6485242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4502676 |
End bp | 4504325 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642739843 |
Product | acetate permease |
Protein accession | YP_002043525 |
Protein GI | 194444560 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family [TIGR02711] cation/acetate symporter ActP |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAGAG TTCTGACGGC GCTCGCCGCC GCTCTCCCCT TCGCCGCTCA TGCGGCGGAT GCCATTAGCG GCGCGGTTGA ACGCCAGCCC ACCAACTGGC AAGCGATTAT CATGTTTTTG ATTTTCGTCG TGTTTACGCT CGGTATTACC TACTGGGCCT CTAAACGCGT ACGTTCCCGT AGCGACTACT ACACGGCTGG CGGCAATATC ACCGGGTTCC AGAACGGCCT GGCGATTGCC GGCGACTATA TGTCTGCCGC GTCATTTCTC GGCATTTCCG CGCTGGTGTT TACCTCCGGT TATGACGGGC TGATCTATTC GCTGGGCTTC CTTGTCGGCT GGCCAATCAT CCTGTTTTTG ATTGCCGAGC GCCTGCGTAA TCTGGGACGT TATACTTTTG CTGACGTTGC CTCTTATCGC CTGAAACAGG GGCCAATCCG TATTCTTTCG GCCTGTGGCT CCCTGGTAGT GGTGGCGCTT TATCTCATCG CCCAAATGGT CGGCGCCGGT AAACTGATTG AACTGCTGTT CGGCCTCAAC TATCACATCG CTGTGGTGCT GGTCGGCGTG CTGATGATGA TGTACGTGCT GTTCGGCGGG ATGCTGGCGA CAACGTGGGT GCAAATTATC AAAGCCGTCC TGTTGCTGTT TGGCGCCAGT TTTATGGCCT TTATGGTGAT GAAACACGTC GGCTTTAGCT TCAATAATCT GTTTACCGAA GCCATGGCGG TACACCCGAA AGGCACGGCG ATTATGAGCC CAGGAGGATT GGTGCAAGAT CCGATTTCGG CATTGTCGTT GGGTCTGGGA CTGATGTTCG GCACCGCCGG CTTGCCGCAT ATTCTGATGC GTTTCTTTAC GGTCAGCGAT GCCCGCGAAG CGCGCAAGAG CGTGTTCTAC GCCACCGGTT TTATGGGCTA TTTCTACATT CTGACCTTTA TTATCGGCTT CGGCGCTATC ATGCTGGTGG GGGCGAATCC CGCCTATAAA GATGCCGCGG GCGCGCTGAT TGGCGGCAAT AACATGGCGG CGGTGCATCT GGCCAACGCG GTAGGCGGTA ACCTGTTCCT CGGCTTTATT TCGGCAGTGG CGTTTGCCAC CATTCTGGCG GTGGTCGCAG GTCTGACGCT GGCGGGCGCA TCGGCGGTGT CGCATGACTT GTACGCCAAC GTGTTCCGCA AAGGCGCAAC CGAACGTGAA GAGCTGAAGG TGTCGAAAAT CACCGTCCTG GTGCTGGGCG TGATCGCCAT TATCCTCGGC ATCCTGTTTG AAAATCAGAA CATCGCCTTT ATGGTGGGCC TGGCATTTGC TATCGCCGCG AGCTGCAACT TCCCCATCAT TCTGCTTTCC ATGTACTGGT CAAAACTGAC CACGCGCGGC GCTATGCTGG GCGGCTGGTT AGGTTTACTG ACAGCGGTGG TGCTGATGAT TCTTGGCCCT ACCATTTGGG TGCAGATCCT CGGCCACGAA AAAGCGATCT TCCCGTATGA GTATCCGGCG CTGTTCTCTA TCAGCGTGGC GTTCCTGGGG ATCTGGTTCT TCTCGGCCAC CGATAACTCG GCAGAAGGCA ACCGTGAACG TGAGCAGTTC CGCGCTCAGT TTATCCGCTC CCAAACGGGA TTCGGCGTAC AACAAGGGCG TGCGCATTAA
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Protein sequence | MKRVLTALAA ALPFAAHAAD AISGAVERQP TNWQAIIMFL IFVVFTLGIT YWASKRVRSR SDYYTAGGNI TGFQNGLAIA GDYMSAASFL GISALVFTSG YDGLIYSLGF LVGWPIILFL IAERLRNLGR YTFADVASYR LKQGPIRILS ACGSLVVVAL YLIAQMVGAG KLIELLFGLN YHIAVVLVGV LMMMYVLFGG MLATTWVQII KAVLLLFGAS FMAFMVMKHV GFSFNNLFTE AMAVHPKGTA IMSPGGLVQD PISALSLGLG LMFGTAGLPH ILMRFFTVSD AREARKSVFY ATGFMGYFYI LTFIIGFGAI MLVGANPAYK DAAGALIGGN NMAAVHLANA VGGNLFLGFI SAVAFATILA VVAGLTLAGA SAVSHDLYAN VFRKGATERE ELKVSKITVL VLGVIAIILG ILFENQNIAF MVGLAFAIAA SCNFPIILLS MYWSKLTTRG AMLGGWLGLL TAVVLMILGP TIWVQILGHE KAIFPYEYPA LFSISVAFLG IWFFSATDNS AEGNREREQF RAQFIRSQTG FGVQQGRAH
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