Gene SNSL254_A4619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4619 
SymbolactP 
ID6485242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4502676 
End bp4504325 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content56% 
IMG OID642739843 
Productacetate permease 
Protein accessionYP_002043525 
Protein GI194444560 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family
[TIGR02711] cation/acetate symporter ActP 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAG TTCTGACGGC GCTCGCCGCC GCTCTCCCCT TCGCCGCTCA TGCGGCGGAT 
GCCATTAGCG GCGCGGTTGA ACGCCAGCCC ACCAACTGGC AAGCGATTAT CATGTTTTTG
ATTTTCGTCG TGTTTACGCT CGGTATTACC TACTGGGCCT CTAAACGCGT ACGTTCCCGT
AGCGACTACT ACACGGCTGG CGGCAATATC ACCGGGTTCC AGAACGGCCT GGCGATTGCC
GGCGACTATA TGTCTGCCGC GTCATTTCTC GGCATTTCCG CGCTGGTGTT TACCTCCGGT
TATGACGGGC TGATCTATTC GCTGGGCTTC CTTGTCGGCT GGCCAATCAT CCTGTTTTTG
ATTGCCGAGC GCCTGCGTAA TCTGGGACGT TATACTTTTG CTGACGTTGC CTCTTATCGC
CTGAAACAGG GGCCAATCCG TATTCTTTCG GCCTGTGGCT CCCTGGTAGT GGTGGCGCTT
TATCTCATCG CCCAAATGGT CGGCGCCGGT AAACTGATTG AACTGCTGTT CGGCCTCAAC
TATCACATCG CTGTGGTGCT GGTCGGCGTG CTGATGATGA TGTACGTGCT GTTCGGCGGG
ATGCTGGCGA CAACGTGGGT GCAAATTATC AAAGCCGTCC TGTTGCTGTT TGGCGCCAGT
TTTATGGCCT TTATGGTGAT GAAACACGTC GGCTTTAGCT TCAATAATCT GTTTACCGAA
GCCATGGCGG TACACCCGAA AGGCACGGCG ATTATGAGCC CAGGAGGATT GGTGCAAGAT
CCGATTTCGG CATTGTCGTT GGGTCTGGGA CTGATGTTCG GCACCGCCGG CTTGCCGCAT
ATTCTGATGC GTTTCTTTAC GGTCAGCGAT GCCCGCGAAG CGCGCAAGAG CGTGTTCTAC
GCCACCGGTT TTATGGGCTA TTTCTACATT CTGACCTTTA TTATCGGCTT CGGCGCTATC
ATGCTGGTGG GGGCGAATCC CGCCTATAAA GATGCCGCGG GCGCGCTGAT TGGCGGCAAT
AACATGGCGG CGGTGCATCT GGCCAACGCG GTAGGCGGTA ACCTGTTCCT CGGCTTTATT
TCGGCAGTGG CGTTTGCCAC CATTCTGGCG GTGGTCGCAG GTCTGACGCT GGCGGGCGCA
TCGGCGGTGT CGCATGACTT GTACGCCAAC GTGTTCCGCA AAGGCGCAAC CGAACGTGAA
GAGCTGAAGG TGTCGAAAAT CACCGTCCTG GTGCTGGGCG TGATCGCCAT TATCCTCGGC
ATCCTGTTTG AAAATCAGAA CATCGCCTTT ATGGTGGGCC TGGCATTTGC TATCGCCGCG
AGCTGCAACT TCCCCATCAT TCTGCTTTCC ATGTACTGGT CAAAACTGAC CACGCGCGGC
GCTATGCTGG GCGGCTGGTT AGGTTTACTG ACAGCGGTGG TGCTGATGAT TCTTGGCCCT
ACCATTTGGG TGCAGATCCT CGGCCACGAA AAAGCGATCT TCCCGTATGA GTATCCGGCG
CTGTTCTCTA TCAGCGTGGC GTTCCTGGGG ATCTGGTTCT TCTCGGCCAC CGATAACTCG
GCAGAAGGCA ACCGTGAACG TGAGCAGTTC CGCGCTCAGT TTATCCGCTC CCAAACGGGA
TTCGGCGTAC AACAAGGGCG TGCGCATTAA
 
Protein sequence
MKRVLTALAA ALPFAAHAAD AISGAVERQP TNWQAIIMFL IFVVFTLGIT YWASKRVRSR 
SDYYTAGGNI TGFQNGLAIA GDYMSAASFL GISALVFTSG YDGLIYSLGF LVGWPIILFL
IAERLRNLGR YTFADVASYR LKQGPIRILS ACGSLVVVAL YLIAQMVGAG KLIELLFGLN
YHIAVVLVGV LMMMYVLFGG MLATTWVQII KAVLLLFGAS FMAFMVMKHV GFSFNNLFTE
AMAVHPKGTA IMSPGGLVQD PISALSLGLG LMFGTAGLPH ILMRFFTVSD AREARKSVFY
ATGFMGYFYI LTFIIGFGAI MLVGANPAYK DAAGALIGGN NMAAVHLANA VGGNLFLGFI
SAVAFATILA VVAGLTLAGA SAVSHDLYAN VFRKGATERE ELKVSKITVL VLGVIAIILG
ILFENQNIAF MVGLAFAIAA SCNFPIILLS MYWSKLTTRG AMLGGWLGLL TAVVLMILGP
TIWVQILGHE KAIFPYEYPA LFSISVAFLG IWFFSATDNS AEGNREREQF RAQFIRSQTG
FGVQQGRAH