Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4590 |
Symbol | alr |
ID | 6483532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4459206 |
End bp | 4460285 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642739815 |
Product | alanine racemase |
Protein accession | YP_002043497 |
Protein GI | 194444595 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0787] Alanine racemase |
TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.718448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 78 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCGG CAACAGTCGT CATTAACCGC CGCGCTCTGC GACACAACCT GCAACGTCTG CGTGAACTGG CGCCTGCCAG TAAGCTGGTT GCGGTGGTGA AAGCGAACGC TTATGGACAC GGTCTTCTGG AGACCGCGCG AACGCTCCCT GATGCTGACG CTTTTGGCGT GGCGCGTCTT GAAGAGGCTC TACGTCTGCG AGCGGGCGGG ATCACGCAGC CTATCCTGCT GCTGGAGGGT TTTTTCGACG CCGCCGATTT GCCGACCATT TCCGCGCAAT GTCTGCATAC CGCCGTACAT AATCAAGAGC AGCTTGCCGC CCTGGAGGCG GTGGAGCTGG CGGAGCCGGT AACGGTCTGG ATGAAGCTGG ATACCGGTAT GCATCGTCTC GGCGTGCGTC CCGAAGAGGC GGAGGCGTTC TACCAGCGTC TGACGCACTG TAAAAATGTA CGCCAGCCGG TGAATATCGT CAGCCATTTT GCCCGTGCGG ATGAGCCGGA ATGCGGCGCT ACCGAACATC AGCTCGACAT TTTTAATGCC TTCTGTCGGG GTAAACCCGG GCAGCGCTCT ATTGCCGCGT CTGGCGGTAT TCTGCTGTGG CCGCAGTCTC ACTTTGACTG GGCGCGTCCG GGCATAATTT TGTATGGCGT ATCGCCGCTG GAACACAAAC CCTGGGGGCC TGATTTTGGT TTTCAGCCGG TGATGTCCTT AACCTCCAGT TTGATCGCGG TGCGTGACCA CAAAGCGGGC GAACCGGTGG GCTACGGCGG GACATGGGTG AGTGAGCGCG ACACGCGCCT GGGCGTGGTG GCGATGGGGT ATGGCGATGG CTACCCACGA GCGGCGCCTT CCGGTACGCC AGTACTGGTC AATGGTCGTG AAGTCCCGAT TGTCGGGCGG GTGGCGATGG ATATGATTTG CGTGGATTTG GGGCCAAACG CGCAGGATAA CGCGGGCGAT CCGGTGGTCT TATGGGGTGA AGGTCTGCCG GTTGAACGTA TCGCTGAAAT GACAAAAGTA AGTGCTTACG AACTTATCAC GCGCCTGACC TCAAGGGTGG CGATGAAGTA TATTGATTAA
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Protein sequence | MQAATVVINR RALRHNLQRL RELAPASKLV AVVKANAYGH GLLETARTLP DADAFGVARL EEALRLRAGG ITQPILLLEG FFDAADLPTI SAQCLHTAVH NQEQLAALEA VELAEPVTVW MKLDTGMHRL GVRPEEAEAF YQRLTHCKNV RQPVNIVSHF ARADEPECGA TEHQLDIFNA FCRGKPGQRS IAASGGILLW PQSHFDWARP GIILYGVSPL EHKPWGPDFG FQPVMSLTSS LIAVRDHKAG EPVGYGGTWV SERDTRLGVV AMGYGDGYPR AAPSGTPVLV NGREVPIVGR VAMDMICVDL GPNAQDNAGD PVVLWGEGLP VERIAEMTKV SAYELITRLT SRVAMKYID
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