| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4500 |
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| Symbol | hemE |
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| ID | 6484234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 4374282 |
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| End bp | 4375346 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642739729 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_002043415 |
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| Protein GI | 194445303 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.00407137 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGAAC TCAAAAACGA TCGTTATCTA CGTGCGCTGC TGCGCCAGCC CGTTGATGTT
ACGCCAGTGT GGATGATGCG CCAGGCGGGC CGTTATCTAC CGGAGTACAA AGCCACTCGC
GCTCAGGCGG GCGATTTTAT GTCGCTGTGC AAAAATGCCG AACTGGCCTG CGAGGTCACT
TTACAGCCGC TGCGCCGTTA TCCGCTTGAT GCGGCGATCC TTTTCTCGGA TATCCTGACG
GTTCCGGACG CGATGGGCCT GGGGCTGTAC TTCGAAGCCG GGGAAGGCCC GCGCTTTACG
GCCCCTGTCA CCTGCAAAGC CGATGTCGAT AAGTTGCCCA TTCCCGATCC GGAGGATGAA
CTGGGCTACG TGATGAATGC GGTGCGTACG ATTCGCCGTG AACTAAAAGG CGAGGTTCCG
CTGATCGGCT TCTCCGGCAG CCCGTGGACG CTGGCAACTT ACATGGTGGA AGGCGGCAGT
AGCAAAGCCT TCACGGTGAT TAAAAAGATG ATGTACGCTG ACCCGCAGGC GTTGCATCTG
CTGCTGGATA AGTTGGCGAA AAGCGTCACG CTGTACCTCA ACGCGCAAAT CAAAGCGGGC
GCGCAGTCGG TGATGATTTT CGACACCTGG GGCGGCGTGC TGACTGGCCG CGATTACCAG
CAGTTCTCCC TCTACTACAT GCATAAAATC GTCGATGGCC TGCTGCGTGA AAACGACGGT
CGCCGCGTGC CGGTAACGCT GTTCACTAAA GGTGGCGGTC AGTGGCTGGA GGCGATGGCG
GAAACCGGCT GCGACGCGCT GGGTCTCGAC TGGACGACAG ATATCGCTGA TGCGCGCCGT
CGCGTTGGCC ATAAAGTGGC GCTGCAGGGC AATATGGACC CCTCGATGCT GTATGCGCCA
CCGGCACGGA TCGAAGACGA AGTAGCGACT ATACTTGCTG GTTTCGGTCA GGGAGAAGGG
CACGTCTTTA ACCTTGGACA TGGCATCCAT CAGGATGTGC CGCCAGAACA TGCTGGCGCA
TTTGTGGAGG CAGTGCACCG ACTTTCTGCG CAGTATCACA ACTAA
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| Protein sequence | MTELKNDRYL RALLRQPVDV TPVWMMRQAG RYLPEYKATR AQAGDFMSLC KNAELACEVT
LQPLRRYPLD AAILFSDILT VPDAMGLGLY FEAGEGPRFT APVTCKADVD KLPIPDPEDE
LGYVMNAVRT IRRELKGEVP LIGFSGSPWT LATYMVEGGS SKAFTVIKKM MYADPQALHL
LLDKLAKSVT LYLNAQIKAG AQSVMIFDTW GGVLTGRDYQ QFSLYYMHKI VDGLLRENDG
RRVPVTLFTK GGGQWLEAMA ETGCDALGLD WTTDIADARR RVGHKVALQG NMDPSMLYAP
PARIEDEVAT ILAGFGQGEG HVFNLGHGIH QDVPPEHAGA FVEAVHRLSA QYHN
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