Gene SNSL254_A4408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4408 
Symbol 
ID6485313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4280722 
End bp4281015 
Gene Length294 bp 
Protein Length97 aa 
Translation table11 
GC content44% 
IMG OID642739647 
Productautoinducer-2 (AI-2) modifying protein LsrG 
Protein accessionYP_002043341 
Protein GI194446433 
COG category[S] Function unknown 
COG ID[COG1359] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.884642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCACG TTACGCTGGT TGAAATTAAC GTTCATGATG ACAAGGTTGA ACAATTTATC 
GATGTTTTTC GGCAGAATCA TCTGGGCTCA ATTAAAGAGC CGGGTAACTT GCGTTTTGAT
GTTCTGCAGG ATCCGCAGGT GCCTACGCGA TTTTATATTT ATGAAGCCTA CGTTGATGAA
CAGGCCGTCG CTTTTCACAA GACAACGCCA CACTACAAAA CTTGCGTGGA GCAGCTTGAA
CCGTTGATGA CCGGTCCGCG GACAAAAAAA GTTTTTATGG GTTTGATGCC TTAA
 
Protein sequence
MMHVTLVEIN VHDDKVEQFI DVFRQNHLGS IKEPGNLRFD VLQDPQVPTR FYIYEAYVDE 
QAVAFHKTTP HYKTCVEQLE PLMTGPRTKK VFMGLMP