Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4326 |
Symbol | rhaU |
ID | 6486612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4213812 |
End bp | 4214126 |
Gene Length | 315 bp |
Protein Length | 104 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642739570 |
Product | L-rhamnose 1-epimerase |
Protein accession | YP_002043264 |
Protein GI | 194446616 |
COG category | [S] Function unknown |
COG ID | [COG3254] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR02625] L-rhamnose 1-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.272019 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA AAGCCTTTGT GATGCAGGTA AATGCCGACG CGCACGAGGA GTATCAGCGT CGTCATAACC CAATCTGGCC GGAGCTGGAA GCCGTATTAA AATCTCACGG CGCGCATCAC TACGCGATTT ATCTCGATCA GGAGCGCAAT CTGCTGTTCG CCACCGTTGA GATTGAATCC GAGGAGCGCT GGAACGCCGT TGCCAGCACC GACGTTTGCC AGCGTTGGTG GAAACATATG CGTGACGTTA TGCCCGCGAA TCCGGATAAC AGCCCGGCCA GCGCAGAGCT AAAAGAGGTG TTCTATCTGC AGTAA
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Protein sequence | MIRKAFVMQV NADAHEEYQR RHNPIWPELE AVLKSHGAHH YAIYLDQERN LLFATVEIES EERWNAVAST DVCQRWWKHM RDVMPANPDN SPASAELKEV FYLQ
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