Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4220 |
Symbol | hemC |
ID | 6486297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 4111359 |
End bp | 4112321 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642739473 |
Product | porphobilinogen deaminase |
Protein accession | YP_002043172 |
Protein GI | 194442426 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0181] Porphobilinogen deaminase |
TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.782422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATAATGA CGGTAACAAG CATGTTAGAC AATGTTTTAA GAATTGCCAC ACGCCAAAGT CCCCTTGCGC TTTGGCAGGC ACATTATGTC AAAGACGCAT TGATGGCAAC CCATCCGGGA CTGACGGTAG AACTGGTGCC GATGGTCACA CGCGGCGACG TGATTCTCGA TACTCCCCTG GCAAAAGTGG GCGGTAAGGG ACTGTTTGTT AAAGAGCTTG AAATCGCGCT GCTGGAAAAG CGCGCTGATA TCGCCGTGCA CTCTATGAAA GACGTTCCGG TGGCCTTCCC GGACGGTCTC GGTCTGGTGA CCATTTGCGA GCGCGAAGAT CCGCGCGACG CGTTTGTCTC GAATAAATAT CACAGTCTGG ACGATCTGCC CGCGGGTAGT ATCGTCGGGA CGTCCAGTTT GCGTCGTCAG TGTCAACTGG CGGAACGCCG TCCGGACCTC ATTATCCGTT CGTTGCGCGG CAACGTCGGC ACACGTCTCG GCAAGCTGGA CAACGGCGAC TATGACGCCA TTATCCTGGC CGTGGCCGGT CTGAAACGCT TAGGTCTGGA GTCGCGCATT CGCACAGCCT TGCCGCCCGA CGTTTCACTT CCTGCCGTAG GCCAGGGCGC CGTCGGGATT GAGTGTCGTC TTGACGACGC GCGAACGCAG GCGCTGCTCG CACCGTTGAA TCACTCGCAA ACCGCGCTGC GCGTAACGGC GGAACGCGCT ATGAACACCC GCCTGGAAGG CGGGTGTCAG GTGCCAATTG GCAGCTATGC AGAAATCATC AACGGTGAAA TTTGGTTACG CGCGCTGGTT GGCGCACCGG ACGGTTCGGT GATGGTGCGC GGCGAACGTC GTGGTTCTCC CGAGCAGGCG GAGCAAATGG GCATCTCGCT TGCAGAGGAA CTGCTGGAAA ACGGCGCACG CGCGATTCTG ACGGAAGTTT ATAACGGCGA GACGCCCGCA TGA
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Protein sequence | MIMTVTSMLD NVLRIATRQS PLALWQAHYV KDALMATHPG LTVELVPMVT RGDVILDTPL AKVGGKGLFV KELEIALLEK RADIAVHSMK DVPVAFPDGL GLVTICERED PRDAFVSNKY HSLDDLPAGS IVGTSSLRRQ CQLAERRPDL IIRSLRGNVG TRLGKLDNGD YDAIILAVAG LKRLGLESRI RTALPPDVSL PAVGQGAVGI ECRLDDARTQ ALLAPLNHSQ TALRVTAERA MNTRLEGGCQ VPIGSYAEII NGEIWLRALV GAPDGSVMVR GERRGSPEQA EQMGISLAEE LLENGARAIL TEVYNGETPA
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