Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4166 |
Symbol | rbsC |
ID | 6485671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 4059882 |
End bp | 4060847 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642739422 |
Product | ribose ABC transporter permease protein |
Protein accession | YP_002043131 |
Protein GI | 194446074 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACCC AGGCTGTTTC TGGTCGCCGT TATTTCACTA AAGCGTGGCT TCTTGAGCAG AAGTCGCTCA TTGCCCTGCT GGTGCTGATC GCGATTGTGT CGACGTTAAG CCCCAACTTT TTTACCGTTA ATAATCTGTT CAATATTCTT CAACAGACCT CCGTTAACGC CATTATGGCG GTGGGGATGA CGTTGGTGAT TCTGACATCG GGGATCGATC TGTCCGTCGG TTCCCTGCTG GCGCTCACCG GTGCGGTTGC CGCTTCAATC GTCGGCGTTG AAGTGAATGC GCTGGTCGCG GTTGCCGCCG CGCTGGCGCT GGGCGCTGCG ATTGGCGCCG TCACTGGCGT TATCGTCGCG AAGGGCCGCG TACAGGCGTT TATCGCTACG CTGGTGATGA TGCTGCTACT GCGTGGCGTG ACGATGGTTT ACACCGACGG TAGCCCGGTC AACACCGGCT TTACCGATAA CGCCGATCTG TTTGGCTGGT TCGGTATCGG TCGTCCGCTG GGCGTTCCTA CGCCGGTCTG GATCATGGCT ATCGTCTTTA TCGCCGCCTG GTATATGCTG CATCACACTC GTCTGGGACG CTATATCTAC GCGCTGGGCG GTAACGAAGC GGCGACGCGT CTGTCTGGCA TTAGCGTGAG CAAAGTGAAA ATTATCGTCT ATTCACTTTG CGGCCTGACA GCATCGCTAG CGGGCATCAT TGAAGTGGCG CGCCTCTCTT CCGCGCAGCC GACGGCGGGT ACCGGCTATG AGCTGGATGC TATTGCCGCC GTGGTGCTGG GCGGCACCAG CCTTGCAGGT GGTAAAGGGC GCATTGTTGG GACATTGATC GGCGCATTGA TTCTCGGCTT CCTTAATAAT GGTTTGAATT TGTTAGGTGT TTCCTCCTAT TACCAGATGA TCGTCAAAGC GGTGGTGATT TTGCTGGCGG TACTGGTAGA CAACAAAAAG CAGTAA
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Protein sequence | MTTQAVSGRR YFTKAWLLEQ KSLIALLVLI AIVSTLSPNF FTVNNLFNIL QQTSVNAIMA VGMTLVILTS GIDLSVGSLL ALTGAVAASI VGVEVNALVA VAAALALGAA IGAVTGVIVA KGRVQAFIAT LVMMLLLRGV TMVYTDGSPV NTGFTDNADL FGWFGIGRPL GVPTPVWIMA IVFIAAWYML HHTRLGRYIY ALGGNEAATR LSGISVSKVK IIVYSLCGLT ASLAGIIEVA RLSSAQPTAG TGYELDAIAA VVLGGTSLAG GKGRIVGTLI GALILGFLNN GLNLLGVSSY YQMIVKAVVI LLAVLVDNKK Q
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