Gene SNSL254_A4159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4159 
SymbolasnC 
ID6486067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4050964 
End bp4051422 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content50% 
IMG OID642739415 
ProductDNA-binding transcriptional regulator AsnC 
Protein accessionYP_002043124 
Protein GI194444346 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0741698 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones100 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATT ATCAGATCGA CAATCTGGAC CGCGGCATAC TTGACGCCTT AATGGAAAAT 
GCCCGCACCG CCTACGCCGA ACTGGCCAAA CAATTTGGCG TTAGCCCTGG AACCATTCAC
GTTCGCGTCG AGAAAATGAA GCAGGCCGGG ATTATTACGG GCGCACGGAT TGACGTCAGC
CCCAAACAGC TGGGCTACGA TGTGGGCTGC TTTATTGGCA TCATTCTCAA AAGCGCCAAA
GACTATCCCT CCGCACTGGC CCGGCTGGAA AGCCTGGATG AAGTGACGGA AGCGTATTAC
ACCACCGGTC ACTACAGCAT CTTTATAAAA GTGATGTGCA AATCAATCGA CGCGCTTCAG
CACGTACTTA TCAACAAGAT CCAAACAATT GATGAAATTC AGTCCACTGA GACACTGATC
GTCTTGCAGA ACCCGATCAT GCGCACCATC AAGCCATGA
 
Protein sequence
MENYQIDNLD RGILDALMEN ARTAYAELAK QFGVSPGTIH VRVEKMKQAG IITGARIDVS 
PKQLGYDVGC FIGIILKSAK DYPSALARLE SLDEVTEAYY TTGHYSIFIK VMCKSIDALQ
HVLINKIQTI DEIQSTETLI VLQNPIMRTI KP