Gene SNSL254_A4122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4122 
SymboldnaN 
ID6485930 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4013102 
End bp4014202 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content57% 
IMG OID642739378 
ProductDNA polymerase III subunit beta 
Protein accessionYP_002043087 
Protein GI194444384 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.381174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones88 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTA CCGTTGAACG TGAACATTTA TTAAAACCGC TTCAGCAGGT CAGCGGCCCG 
CTGGGCGGCC GTCCTACGCT GCCGATTCTC GGTAACCTGC TCCTCCAGGT AGCGGACGGT
ACGCTTTCTC TGACCGGCAC CGATCTTGAA ATGGAGATGG TCGCGCGCGT TACGCTTTCT
CAGCCGCATG AGCCAGGCGC CACTACCGTG CCGGCGCGGA AATTCTTTGA TATCTGCCGC
GGCCTGCCGG AGGGCGCGGA GATTGCCGTT CAGTTGGAAG GCGATCGGAT GCTGGTGCGT
TCTGGCCGTA GCCGCTTCTC GCTGTCTACG CTGCCTGCCG CCGATTTCCC GAATCTTGAC
GACTGGCAAA GCGAAGTTGA ATTTACGCTG CCGCAGGCCA CGATGAAGCG CCTGATTGAA
TCGACCCAGT TTTCGATGGC CCATCAGGAT GTGCGCTACT ACTTAAACGG TATGCTGTTT
GAAACGGAAG GTAGCGAACT GCGCACTGTC GCGACCGACG GCCACCGTCT GGCGGTGTGC
TCAATGCCGC TGGAAGCGTC TTTACCCAGC CACTCGGTGA TTGTGCCGCG TAAAGGCGTG
ATTGAACTGA TGCGTATGCT CGACGGCGGC GAAAACCCGC TGCGCGTGCA GATTGGCAGT
AATAATATCC GCGCGCACGT CGGCGACTTT ATCTTTACCT CGAAGCTGGT GGATGGTCGC
TTCCCGGATT ACCGTCGCGT TCTGCCGAAG AATCCGGATA AACATCTGGA AGCGGGCTGC
GATATCCTCA AGCAGGCGTT TGCCCGCGCA GCAATCCTCT CGAATGAGAA ATTCCGCGGC
GTGCGTCTGT ACGTCAGTGA GAATCAGCTC AAAATCACCG CCAATAACCC GGAACAGGAA
GAAGCGGAAG AGATTCTGGA CGTGAGCTAC GGCGGGACGG AGATGGAAAT CGGCTTTAAC
GTCAGTTACG TGCTGGACGT GCTCAATGCG CTGAAGTGCG AAACCGTGCG CATTATGCTG
ACGGATTCCG TATCCAGCGT ACAGATTGAG GATGCGGCGT CACAGAGTGC TGCCTACGTT
GTTATGCCAA TGAGGCTGTA G
 
Protein sequence
MKFTVEREHL LKPLQQVSGP LGGRPTLPIL GNLLLQVADG TLSLTGTDLE MEMVARVTLS 
QPHEPGATTV PARKFFDICR GLPEGAEIAV QLEGDRMLVR SGRSRFSLST LPAADFPNLD
DWQSEVEFTL PQATMKRLIE STQFSMAHQD VRYYLNGMLF ETEGSELRTV ATDGHRLAVC
SMPLEASLPS HSVIVPRKGV IELMRMLDGG ENPLRVQIGS NNIRAHVGDF IFTSKLVDGR
FPDYRRVLPK NPDKHLEAGC DILKQAFARA AILSNEKFRG VRLYVSENQL KITANNPEQE
EAEEILDVSY GGTEMEIGFN VSYVLDVLNA LKCETVRIML TDSVSSVQIE DAASQSAAYV
VMPMRL