Gene SNSL254_A4116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A4116 
Symbol 
ID6483368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp4004789 
End bp4005634 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content52% 
IMG OID642739372 
Productsugar phosphatase 
Protein accessionYP_002043081 
Protein GI194445079 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTA AACTCATTGC TATCGACATG GATGGCACCC TTCTGCTGCC CGATCACACC 
ATTTCTCCGG CGGTTAAAAA CGCGATTGCC GCTGCGCGTG AAAAAGGGGT AAATGTGGTG
CTGACCACAG GCCGTCCGTA TGCGGGTGTG CACAGCTATC TGAAAGAACT TCACATGGAA
CAGCCCGGTG ATTATTGCAT CACCTATAAC GGGGCGCTGG TGCAGAAAGC AGGGGACGGC
AGTACGGTTG CGCAAACGGC GCTCAGCTAT GATGACTACC GTTACCTGGA AAAACTGTCC
CGTGAGGTGG GTTCTCACTT CCACGCATTA GACCGAAATA CGCTTTATAC CGCTAACCGC
GATATCAGCT ACTACACGGT GCATGAGTCG TATGTGGCGA CCATTCCGTT GGTATTTTGT
GAAGCGGAGA AGATGGACCC GAACACCCAG TTCCTGAAAG TTATGATGAT CGATGAGCCT
GCCGTTCTCG ACCGGGCGAT TGCGCGTATA CCGGCAGAGG TGAAGGAAAA GTACACCGTG
CTGAAAAGTG CGCCGTACTT CCTTGAAATC CTCGATAAAC GGGTTAATAA AGGCACCGGC
GTAAAATCAC TGGCCGAGGC GCTGGGTATT AAGCCAGAGG AGGTGATGGC GATTGGCGAT
CAGGAAAACG ACATTGCGAT GATCGAATAC GCCGGCATGG GCGTGGCAAT GGACAACGCC
ATTCCGTCGG TCAAAGAGGT GGCTAACTTT GTGACTAAAT CGAACCTTGA AGATGGTGTT
GCCTGGGCGA TTGAAAAATT TGTGCTGAAC CCCGATCACT CATCCGGCCA TTTTCCCGCC
CGATAA
 
Protein sequence
MAIKLIAIDM DGTLLLPDHT ISPAVKNAIA AAREKGVNVV LTTGRPYAGV HSYLKELHME 
QPGDYCITYN GALVQKAGDG STVAQTALSY DDYRYLEKLS REVGSHFHAL DRNTLYTANR
DISYYTVHES YVATIPLVFC EAEKMDPNTQ FLKVMMIDEP AVLDRAIARI PAEVKEKYTV
LKSAPYFLEI LDKRVNKGTG VKSLAEALGI KPEEVMAIGD QENDIAMIEY AGMGVAMDNA
IPSVKEVANF VTKSNLEDGV AWAIEKFVLN PDHSSGHFPA R