Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4109 |
Symbol | torS |
ID | 6485027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3997083 |
End bp | 3999770 |
Gene Length | 2688 bp |
Protein Length | 895 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642739366 |
Product | hybrid sensory histidine kinase TorS |
Protein accession | YP_002043075 |
Protein GI | 194444775 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR02956] TMAO reductase sytem sensor TorS |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.551512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 75 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGCAC TCACTCTGCT CAGCACCGTG ATCGGCTGGA TAAGCCTGTG CGTCATTAGT CAGGTGGAGC AAACCAATAC GCAAGCGCTG CTCCCCACGA TGAATATGGC CAGGCAGTTA AGCGAAGCCA GCGCTTACGA GCTCTTTTCC GCGCAAAATC TGACCAATGC CGACAGTGAG GGCGTTTGGC TGGCGCAGGG GAAGATGCTG AAAGCGCAAA GCCTTAAAAT TAACCATCTT TTGCAGGCAT TAAGCGAGCA GGGGTTTAAT ACCTCGGCCA TCGCCCGGCA AGAAAAAGAG ATTGCGCAAA CGCTTGGGCA ACAGGGAACG CTGGTCGGTG AAATTCTCAC GCTGCGCGCA CAGCAACAGC AGTTAAGCCG CCAGATTGCG GAGGCGGCGG AAAGCATTGC CGCCCAGGCT CACGGCCAGG CCAATAATGC CGCGACATCT GCGGGCGCCA CCCAGGCCGG TATTTACGAT CTTATCGAAA GCGGTAAAGG GGATCAGGCT GAACGCGCGC TTGACCGACT GATTGATATC GACCTTGAGT ATGTGAATCA GATGAATGAG TTGCGGGTCA ATGCCCTGCG GTTTAAGCAG CTCATTGTGA CCTTAAAAGA CGCGCAAGGG CTGAGCGATG CCGAGGAAAC CGATGAAAAA CTTAATCAGT TGGTTAAAAT TTTATCCCGC CGCCAGCAGC GTATAGAAGA TCCTACCGTT CGCGCCCAAA TCGCCGACGC GCTGGAGAAA ATAAACCAGT ACACCACGCT GGTTACCCTG TTTCGTAAGG AAAACGCTAT CCGCGACCAG CTTCAAACGC TTATGGCCAA TAACCTCTTT CAGTTTACCC GCTTCAGTAC GGAAGTGTCG CAGTTGGTGA ACGCCATCGA AAAACGAAAC GAGGCTGGGT TAGCGCGTCT TACACACGCC AGTCAGCGTG GGCAAATAGG GTTAGTGATC TTAGGCATCC TGGCGCTGTG CTCATTAAGT TTTATTCTTT GGCGAGTGGT TTACCGTTCC GTATCCCGCC CGCTGGCGCA ACAAACGCAG GCCTTACAGC GGTTACTGGA GGGCGATATT GACTCGCCGT TTCCGGAGGC GGCTGGCGTC AGCGAACTGG ATACCATCAG CCGTCTGATG GAAGCGTTTC GCGCCAACGT GCGCAAATTG AACCGCCATC GTGAGGATTT GGCGGAACAG GTGCGTTCGC AAACGGCGGA GCTTCATGCG CTGGTGCTGG AACACCGGCA GGCGCGCGCC GAAGCGGAAA AGGCCAACGA GGCGAAATCG ACGTTCCTTG CCGCCATGAG CCATGAAATT CGCACGCCAC TTTACGGCAT TCTCGGTACG GTACAATTGC TGGCCGATAA ACCGCTCATG GCAAACTACC GCGACGATTT ACAGGCCATT AATGATTCAG GCGAATCGCT ACTGGCGATT CTTAACGATA TTCTTGATTA CTCAGCGATT GAAGTAGGCG GCACCAACGT TTCCATTAGC GAGGAACCGT TTGAACCGCG ACAATTGTTG AATAGCGCGC TGCATTTAAT GCACAGCCGC GTGCAGGTGG CGCTCATCAC CGACTTTAGC GAGCAACTCC CTTCCACGCT ACAAGGCGAT CCGCGCCGGA TACGTCAAAT TGTGATTAAT CTTTTAAGTA ATGCGGCGAA ATTTACCGAT CGCGGCAGCA TAGTGCTGCG CACGTTTTGC GACGATCAGA GCTGGTTTAT TGAGGTTGAA GATACCGGAT GCGGTATCCC TGAAGCAAAG CTGACGGCTA TTTTCAAACC GTTTGTGCAG GCGACTGGAC GCCGGGGCGG GACGGGCCTG GGGCTGGCTA TCAGCGCCAG CCTGGCAGAG GCGATGGGCG GGACGCTAAC CGTCACCAGT ACGCTTCATG TTGGCAGTTG TTTTCGCTTA CAACTGCCGG TTCGCCACCC CAAACCCGCA AGCAAAAATG CGTTCAGGGA ACCGATAAAT CTTAACGGAT TACGCCTGTT GCTGATTGAA GATAATATGC TGACGCAGCG TATTACCGCT GAAATGCTCA CGGGCAAAGG GGTGAAGGTC TCAGTAGCTG AAAGCGCGAA TGACGCGCTA CGCTGTTTAG CCGAAGGCGA GTCCTTTGAT GTGGCGCTGG TGGATTTTGA TTTACCGGAT TATGACGGCT TAACCCTGGC GCAGCAGTTG ATGAGTCAGT ATCCCGCCAT GAAACGCATT GGTTTTAGCG CGCATGTGAT AGACGATAAT CTTCGTCAGC GTACCGCCGG TCTTTTCTGC GGGATTATTC AAAAGCCCGT TCCCCGCGAG GAGCTTTACC GCATGATAGC GCACTATTTA CAGGGCAAAT CTCACAATGC GCGGGCGATG CTGAATGAAC ATCAGCTTGC CGGCGATATG GCGTCTGTCG GCCCGGAAAA GCTCCGGCAA TGGGTCGCGT TATTCAAAGA CAGCGCGCTG CCTTTAGTCG AGGAGATCGA GGCGGCGCGC GCCATGAATG ACGACGTTAA CATTAAGCGG CTGGCGCATA AATTAAAAAG CGGCTGCGCC AGCCTGGGGA TGACGCAGGC AACCGAAGCC TGTCGGGAGC TGGAATTGCA ACCGCTTAGC GATATAGATA TTAAAACTAT CGTGACGCAG GGAGTGACGG CGCTCGACGC ATGGATAGCC AGTCATCCTT CGCCATAA
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Protein sequence | MAALTLLSTV IGWISLCVIS QVEQTNTQAL LPTMNMARQL SEASAYELFS AQNLTNADSE GVWLAQGKML KAQSLKINHL LQALSEQGFN TSAIARQEKE IAQTLGQQGT LVGEILTLRA QQQQLSRQIA EAAESIAAQA HGQANNAATS AGATQAGIYD LIESGKGDQA ERALDRLIDI DLEYVNQMNE LRVNALRFKQ LIVTLKDAQG LSDAEETDEK LNQLVKILSR RQQRIEDPTV RAQIADALEK INQYTTLVTL FRKENAIRDQ LQTLMANNLF QFTRFSTEVS QLVNAIEKRN EAGLARLTHA SQRGQIGLVI LGILALCSLS FILWRVVYRS VSRPLAQQTQ ALQRLLEGDI DSPFPEAAGV SELDTISRLM EAFRANVRKL NRHREDLAEQ VRSQTAELHA LVLEHRQARA EAEKANEAKS TFLAAMSHEI RTPLYGILGT VQLLADKPLM ANYRDDLQAI NDSGESLLAI LNDILDYSAI EVGGTNVSIS EEPFEPRQLL NSALHLMHSR VQVALITDFS EQLPSTLQGD PRRIRQIVIN LLSNAAKFTD RGSIVLRTFC DDQSWFIEVE DTGCGIPEAK LTAIFKPFVQ ATGRRGGTGL GLAISASLAE AMGGTLTVTS TLHVGSCFRL QLPVRHPKPA SKNAFREPIN LNGLRLLLIE DNMLTQRITA EMLTGKGVKV SVAESANDAL RCLAEGESFD VALVDFDLPD YDGLTLAQQL MSQYPAMKRI GFSAHVIDDN LRQRTAGLFC GIIQKPVPRE ELYRMIAHYL QGKSHNARAM LNEHQLAGDM ASVGPEKLRQ WVALFKDSAL PLVEEIEAAR AMNDDVNIKR LAHKLKSGCA SLGMTQATEA CRELELQPLS DIDIKTIVTQ GVTALDAWIA SHPSP
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