| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A4070 |
|---|
| Symbol | |
|---|
| ID | 6484019 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | - |
|---|
| Start bp | 3959636 |
|---|
| End bp | 3961138 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 642739327 |
|---|
| Product | sensory histidine kinase UhpB |
|---|
| Protein accession | YP_002043036 |
|---|
| Protein GI | 194445392 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3851] Signal transduction histidine kinase, glucose-6-phosphate specific |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 70 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACCT TTTTTTCCCG TTTAATCACC GTTGTTGCCT GCTTTTTTAT TTTCTCCGCC
GCGTGGTTCT GCCTGTGGAG CATCAGCCTG CATCTGGTAG AGCGCCCGGA GCTGGCGGCG
CTACTTTTTC CCTTCGGCCT GCGCCTGGGA CTTATGCTGC AATGCCCGCG CGGATACTGG
CCAGTATTGC TGGGCGCGGA GTGGCTGCTG GTGTACTGGT TGGCGCAGGA AGTTGCGCTG
GCCCATCTGC CGCTTTTGAT GATCGGTGGT GTGTTGACGC TACTGCCCGT GGCGCTGACT
TCGCGTTACC GCCATCAGCG CGACTGGCGC ACGTTATTGC TTCAGGGCGC GGCCCTCACC
GCCGCGGCGC TACTGCAATC CCTGCCCTGG TTGGGGCAGG GGGAAGCGGC ATGGAACGCG
CTACTGCTGA CCCTCACGGG TGGTCTGACG CTGGCCCCCA TCTGCCTGGT TTTCTGGCAC
TATCTCACCA GCACTACCTG GCTGCCGCTG GGACCATCGC TGGTATCGCA GCCGGTAAAC
TGGCGCGGGC GGCATCTGAT CTGGTATCTG CTGCTGTTTA TCGTCAGTCT GTGGCTGCAA
CTGGGTTTAC CTGCTGAACT TTCGCGCTTC ACGCCGTTCT GCCTGGCGTT GCCGATTATC
GCGCTCGCCT GGCATTATGG CTGGCAGGGC GCGCTCATTG CCACACTGAT GAACGCTATC
GCGCTGATCG CCAGCCAGAC CTGGCACGAT CATCCCGTCG ATTTATTACT TTCGCTGTTG
GCGCAAAGCC TGACCGGGCT ACTGCTTGGC GCGGGCATTC AGCGCCTGCG CGAGCTGAAC
CAGTCGTTGC AAAAGGAGCT GGCGCGCAAT CATCGGCTGG CGGAGCGTCT TCTGGAGACC
GAAGAGAGCG TGCGGCGCGA TGTTGCGCGT GAGCTGCACG ATGACATCGG ACAGACCATC
ACCGCGATTC GTACCCAGGC GGGCATTGTG CAACGACTGG CGGCAGATAA CGGCGGCGTG
AAGCAGAGCG GGCAACTTAT CGAGCAGCTT TCGCTGGGCG TGTATGACGC CGTGCGTCGC
CTGCTGGGGC GCTTGCGCCC GCGCCAGCTA GACGACTTAA CGCTGGCGCA GGCCATCCGT
TCGCTGCTAC GCGAAATGGA GCTGGAAAGC CGCGGTATTG TCAGTCACCT CGACTGGCGA
ATTGACGAAA CGGCGCTGAG TGAAAGTCAG CGCGTGACGC TGTTTCGCGT CTGTCAGGAA
GGGCTGAATA ACATCGTAAA ACATGCCAAT GCCAGCGCGG TGACGCTCCA GGGCTGGCAG
CAGGACGAGC GGCTGATGCT GGTAATTGAG GATGACGGCA GCGGCCTGCC GCCGGGCTCT
CACCAGCAGG GCTTCGGCCT GACCGGAATG CGCGAACGCG TGTCGGCGCT CGGCGGGACG
CTAACCATCT CTTGTACCCA CGGTATGCGG GTGAGCGTCT CGTTGCCCCA GCGTTACGTT
TAA
|
|---|
| Protein sequence | MNTFFSRLIT VVACFFIFSA AWFCLWSISL HLVERPELAA LLFPFGLRLG LMLQCPRGYW
PVLLGAEWLL VYWLAQEVAL AHLPLLMIGG VLTLLPVALT SRYRHQRDWR TLLLQGAALT
AAALLQSLPW LGQGEAAWNA LLLTLTGGLT LAPICLVFWH YLTSTTWLPL GPSLVSQPVN
WRGRHLIWYL LLFIVSLWLQ LGLPAELSRF TPFCLALPII ALAWHYGWQG ALIATLMNAI
ALIASQTWHD HPVDLLLSLL AQSLTGLLLG AGIQRLRELN QSLQKELARN HRLAERLLET
EESVRRDVAR ELHDDIGQTI TAIRTQAGIV QRLAADNGGV KQSGQLIEQL SLGVYDAVRR
LLGRLRPRQL DDLTLAQAIR SLLREMELES RGIVSHLDWR IDETALSESQ RVTLFRVCQE
GLNNIVKHAN ASAVTLQGWQ QDERLMLVIE DDGSGLPPGS HQQGFGLTGM RERVSALGGT
LTISCTHGMR VSVSLPQRYV
|
|---|
| |