Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4045 |
Symbol | |
ID | 6486155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3936008 |
End bp | 3936937 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642739303 |
Product | hypothetical protein |
Protein accession | YP_002043012 |
Protein GI | 194446756 |
COG category | [S] Function unknown |
COG ID | [COG5464] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.673826 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.0374243 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAA GCCCCACGTC CACGCCTCAT GATGCGGTAT TCAAAACGTT TTTACGCCAT CCGGATACCG CGCGGGATTT TCTCAATATT CATCTTCCCC ATTCGCTAAG AATACGTTGC GATCTGACGA CGTTAAAACT GGCGCCGGAC AGTTTTATCG AGAAAAATTT ACGCGCGTTT TATTCCGACG TCCTTTGGTC GCTAAAAACG TGTGAAGGCG ATGGTTATAT CTATGTCGTT ATAGAGCATC AGAGTACGCC GGACGCGCAT ATGGCGTTCC GGTTAATGCG TTACGCGACT GCCGCGATGC AGCGCCATCT GGATGCTGGC CATAAAACGT TACCGCTGGT GATTCCCATG CTGTTTTACC ATGGCGCGAA AAGCCCGTAT CCCTTTTCGC TTTGCTGGCT GGATGAGTTT GACGATCCTG CACTGGCGCG TCAGCTTTAT GCGACGGCAT TTCCACTGGT AGACATTACG GTGGTGCCGG ATAACGAGAT TATGCAGCAT CGACGTATCG CGATGCTGGA ACTGGTACAA AAGCATATAC GTCAGCGCGA CCTGATGGGA TTGGTCGAGC GTTTAGCGGT ACTTCTGATT ACGGGAAACG CTAATGACAG TCAGCTAAAA GCGCTGTTTA ATTATTTGCT AATACAGCAT GGCAGCACGC CTCGTTTTGG CAAGTTTATC CGCGAGGTGG CGCGTCGTGT TCCCCAACAC AAGGAGAGAT TAATGACGAT CGTAGACAGA ATACGTGAAT CGGGGCGCAG AAAAGGTAAG CGTGAAGGCG TGCAACAAGG TATACATCAA GGTAAGCAGG AGGAAGCCTT GCGTATTGCG CATACGATGC TGGAACAGGG GATCAATCGA GAGATGGTGC TGATGATTAC CGGGCTTTCT GACGAAGAGA TTAAGGCAAA GCGCCATTAA
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Protein sequence | MKKSPTSTPH DAVFKTFLRH PDTARDFLNI HLPHSLRIRC DLTTLKLAPD SFIEKNLRAF YSDVLWSLKT CEGDGYIYVV IEHQSTPDAH MAFRLMRYAT AAMQRHLDAG HKTLPLVIPM LFYHGAKSPY PFSLCWLDEF DDPALARQLY ATAFPLVDIT VVPDNEIMQH RRIAMLELVQ KHIRQRDLMG LVERLAVLLI TGNANDSQLK ALFNYLLIQH GSTPRFGKFI REVARRVPQH KERLMTIVDR IRESGRRKGK REGVQQGIHQ GKQEEALRIA HTMLEQGINR EMVLMITGLS DEEIKAKRH
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