Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A4043 |
Symbol | |
ID | 6482657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3933862 |
End bp | 3934539 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642739301 |
Product | Mg(2+) transport ATPase protein C |
Protein accession | YP_002043010 |
Protein GI | 194443148 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 0.085999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCCTT ATATTTTAAA TTTACTGGCC GCTATGCTGT TGGGCGCGCT GATTGGCGCG GAAAGACAAT GGCGTCAACG TATGGCGGGA TTACGCACTA ATGCGCTGGT GGCGACAGGC GCCGCCGTTT TTATTCTGAG CTCCATGACG ACATCGCCAG ACAGCCCCGG GCGAATTGCG GCGCAGATTG TCTCTGGGAT TGGCTTTCTG GGGGCGGGCG TCATCATGCG CGAAGGGATG AATGTGCGCG GGCTGAACAC TGCGGCAACG CTATGGTGTT CGGCGGGCAT CGGCGTGTTA TGCGGCTTAG GGCAGTTCAA AAATGCGCTG GCGGCGACGA TCATTATTCT TTGCGCCAAT ATTTTACTGC GTGAAGCGGC GCAGCGTATA AATCAACTCC CGGTATCCGC CGAGGGAGAA AAACGTTATA TCCTGAAAGT AACCTGTAAT AAAGAAGATG AGAGCGAGGT TCGTCAGTGG TTACTGAATA TCGTAAAAGA GGCCGCGATC TGTTTACAAG GGTTAGGTTC GGTCCCCGCT CAGGAACAGG GCTATAAAGA AATTCGTGCC GAGCTCGTGG GTCATGCTGA TTATCGTAAA ACGCGAGAAC TGATTATATC CAGAATAGGT GATAACGATA ATATCACTGC AATTCACTGG AGCATTGATA GTCAATAA
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Protein sequence | MFPYILNLLA AMLLGALIGA ERQWRQRMAG LRTNALVATG AAVFILSSMT TSPDSPGRIA AQIVSGIGFL GAGVIMREGM NVRGLNTAAT LWCSAGIGVL CGLGQFKNAL AATIIILCAN ILLREAAQRI NQLPVSAEGE KRYILKVTCN KEDESEVRQW LLNIVKEAAI CLQGLGSVPA QEQGYKEIRA ELVGHADYRK TRELIISRIG DNDNITAIHW SIDSQ
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