| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3993 |
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| Symbol | |
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| ID | 6486546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3880728 |
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| End bp | 3881942 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642739253 |
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| Product | O-antigen ligase |
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| Protein accession | YP_002042963 |
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| Protein GI | 194443618 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAACCA CATCATTAAC GTTAAATAAA GAGAAATGGA AACCGATCTG GAATAAAGCG
CTGGTTTTTC TTTTTGTTGC CACGTATTTT CTGGATGGTA TTACGCGTTA TAAACATTTG
ATAATCATAC TTATGGTTAT CACCGCGATT TATCAGGTCT CACGCTCACC GAAAAGTTTC
CCCCCTCTTT TCAAAAATAG CATATTTTAT AGCGTAGCAG TATTATCATT AATCCTTGTT
TATTCCATAC TCATATCGCC AGATATGAAA GAAAGCTTCA AGGAATTTGA AAATACGGTA
CTGGAGGGTT TCTTATTATA TACTTTATTA ATTCCCGTAC TATTAAAAGA TGAAACAAAA
GAAACGGTTG CGAAAGTAGT ACTTTTCTCC TTTTTAACAA GTTTAGGACT TCGCTGCCTT
GCAGAGAGTA TTCTATATAT CGAGGACTAT AATAAAGGGA TTATGCCATT CATGAGCTAT
GCGCATCGAC ATATGTCCGA TTCCATGGTT TTCTTATTTC CAGCATTATT GAATATTTGG
CTGTTTAGAA AAAATGCACT TAAGTTGGTT TTTTTGGTGC TTAGCGCTAT CTATCTTTTC
TTTATCCTGG GAACCCTATC GCGAGGGGCA TGGTTGGCGG TGCTCATAGT AGGTGCGCTG
TGGGCAATAC TGAATCGCCA ATGGAAGTTA ATAGGAGTCG GTGCCATTTT ATTAGCCATC
ATCGGCGCTT TGGTTATCAC TCAACATAAT AACCAATCAG ATTCAGAACA TTTACTTTAT
AAATTACAGC AGACAGATAG CTCATCTCGT TATACTAACG GAACCCAGGG CACCGCGTGG
ATACTGATTC AGGAAAACCC GATCAAGGGC TACGGCTATG GTAATGATGT GTATGATGGT
GTTTATAATA AACGCGTTGT CGATTATCCA ACGTGGACCT TTAAAGAATC TATCGGTCCG
CATAATACCA TTCTGTACAT CTGGTTTAGT GCAGGCATAT TAGGTCTGGC GAGCTTGGCC
TATTTATATG GCGCTATCAT CAGGGAAACA GCCAGCTCTA CCTTCAGGAA AGTAGAGATA
AGTCCCTACA ATGCTCATCT CTTGCTATTT TTATCTTTCG TCGGTTTTTA TATCGTTCGT
GGCAATTTTG AACAGGTCGA TATTGCTCAA ACTGGTATCA TTACTGGTTT TCTGCTGGCG
CTAAGAAATA GATAA
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| Protein sequence | MLTTSLTLNK EKWKPIWNKA LVFLFVATYF LDGITRYKHL IIILMVITAI YQVSRSPKSF
PPLFKNSIFY SVAVLSLILV YSILISPDMK ESFKEFENTV LEGFLLYTLL IPVLLKDETK
ETVAKVVLFS FLTSLGLRCL AESILYIEDY NKGIMPFMSY AHRHMSDSMV FLFPALLNIW
LFRKNALKLV FLVLSAIYLF FILGTLSRGA WLAVLIVGAL WAILNRQWKL IGVGAILLAI
IGALVITQHN NQSDSEHLLY KLQQTDSSSR YTNGTQGTAW ILIQENPIKG YGYGNDVYDG
VYNKRVVDYP TWTFKESIGP HNTILYIWFS AGILGLASLA YLYGAIIRET ASSTFRKVEI
SPYNAHLLLF LSFVGFYIVR GNFEQVDIAQ TGIITGFLLA LRNR
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