| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3980 |
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| Symbol | gpsA |
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| ID | 6486105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3867454 |
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| End bp | 3868473 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642739240 |
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| Product | NAD(P)H-dependent glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_002042950 |
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| Protein GI | 194445520 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0240] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 0.386702 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAAA GTAATGCGTC AATGACAGTC ATCGGTGCCG GCTCGTACGG CACCGCTCTC
GCCATCACTC TGGCGAGAAA CGGCCACCAG GTTGTCCTGT GGGGCCACGA CCCAAAACAT
ATCGCGACCC TGGAGCACGA TCGCTGCAAC GTCGCGTTCC TTCCCGATGT GCCTTTTCCC
GATACGTTAC ACCTGGAAAG CGACTTAGCA ACCGCGCTGG CGGCCAGTCG TAACATTCTG
GTGGTGGTGC CAAGCCATGT TTTCAGCGAC GTGCTGCGGC AGATTAAACC GCTGATGCGT
CCGGATGCGC GTCTGGTATG GGCGACCAAA GGCCTGGAAG CGGAAACGGG GCGCCTGTTG
CAGGATGTCG CTCGCGAGGC GTTAGGCGAT CAAATCCCGC TGGCGGTGAT TTCCGGTCCG
ACGTTCGCTA AAGAGCTGGC GGCGGGTTTG CCGACGGCAA TCTCGCTGGC CTCAACCGAT
GAGACCTTTG CCGACGATCT CCAGCAACTG TTGCACTGCG GAAAAAGTTT TCGCGTCTAT
ATCAATGCGG ATTTTATCGG CGTGCAGCTT GGCGGCGCGG TGAAAAACGT GATTGCGATT
GGCGCGGGGA TGTCTGACGG CATCGGCTTC GGCGCGAACG CCCGCACGGC GCTAATCACG
CGTGGACTGA CCGAAATGTC GCGGCTTGGC GCAGCGCTTG GCGCCGATCC CGCCACCTTT
ATGGGGATGG CGGGTTTAGG CGATCTGGTG CTGACCTGTA CCGACAACCA GTCGCGCAAC
CGTCGTTTTG GCATGATGCT TGGCCAGGGC ATGGACGTTA AAGGCGCGCA GGATAAGATT
GGCCAGGTGG TCGAAGGCTA TCGCAATACG AAAGAAGTTC GTGAATTGGC GCACCGTTTT
GGTGTTGAAA TGCCAATAAC CGAGGAAATT TATCAAGTAT TGTATTGCGG AAAAAACGCG
CGCGAGGCAG CATTAACGTT ATTAGGTCGC GCCCGCAAGG AAGAGCTGAG TCGCCACTAG
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| Protein sequence | MNQSNASMTV IGAGSYGTAL AITLARNGHQ VVLWGHDPKH IATLEHDRCN VAFLPDVPFP
DTLHLESDLA TALAASRNIL VVVPSHVFSD VLRQIKPLMR PDARLVWATK GLEAETGRLL
QDVAREALGD QIPLAVISGP TFAKELAAGL PTAISLASTD ETFADDLQQL LHCGKSFRVY
INADFIGVQL GGAVKNVIAI GAGMSDGIGF GANARTALIT RGLTEMSRLG AALGADPATF
MGMAGLGDLV LTCTDNQSRN RRFGMMLGQG MDVKGAQDKI GQVVEGYRNT KEVRELAHRF
GVEMPITEEI YQVLYCGKNA REAALTLLGR ARKEELSRH
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