| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3959 |
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| Symbol | |
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| ID | 6485208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3842198 |
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| End bp | 3843079 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642739219 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_002042929 |
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| Protein GI | 194445844 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | [TIGR00744] ROK family protein (putative glucokinase) |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0229726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 0.500225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAT ATATCGGTAT TGATGTGGGA GGAACTCACG TCAAATATGG CGTGATTAAC
AGTGACGGCG AAGAATTAAC CCATCATCAA TTCGATACGC CAGAGGACGC CTCCACGTTT
ACCCGCAAAT GGCAGGATGT GGTGGCGCGT TGCCAACAGG ACTATGACAT TGCGGCAATC
GGGGTTAGTT TCCCCGGCCA TATTAATCCC CATAACGGTC ATGCGGCAAA AGCGGGCGCG
CTGGCTTACC TGGATGACGT CAACCTGATG GAGTTGTTCA GCGGGCTGAC CGATCTGCCG
CTGGTCGTGG AGAACGACGC GAACTGTGCG GCGCTGGGCG AAATGTGGCG AGGTGCCGGG
CAGCATTATG ACAATCTGGT CTGTATTACC ATTGGAACCG GCATTGGCGG CGGTATTATC
GTCGGACGAG AACTGTATCG CGGCGCGCAT TTTCACGCCG GTGAATTCGG CGTCATGCCG
GTCGGGAACA ATGGCGAAAG TATGCATAAA ATCGCGTCAA CCAGCGGATT AATGGCGTCG
TGCCGCCAGG CGCTGGCGCT GCCTGCCGAA GAGATGCCGC CTGCGGATGT GATCTTCGAA
CGAATGGCGA CCGATGTTCA TCTGCGTGAG GCGGTCAATG ACTGGGCGCG TTATCTTTCA
CGCGGCGTTT ACAGCGTGAT CTCTATGTTT GATCCGGGCG TGGTGCTGAT CGGCGGAGGA
ATAAGCGAAC AGGAAAAGCT CTACCCGCTC CTGACGCGGC ATCTTGAAAC GTTTGAAATG
TGGGAGGCGC TCCAGGTGCC GATTCAGCCC TGCCAACTGG GAAATCAGGC GGGCAGGCTG
GGCGCCGTCT GGCTGGCGCA GCAAAAGCTC GATCGAAGCT AA
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| Protein sequence | MQQYIGIDVG GTHVKYGVIN SDGEELTHHQ FDTPEDASTF TRKWQDVVAR CQQDYDIAAI
GVSFPGHINP HNGHAAKAGA LAYLDDVNLM ELFSGLTDLP LVVENDANCA ALGEMWRGAG
QHYDNLVCIT IGTGIGGGII VGRELYRGAH FHAGEFGVMP VGNNGESMHK IASTSGLMAS
CRQALALPAE EMPPADVIFE RMATDVHLRE AVNDWARYLS RGVYSVISMF DPGVVLIGGG
ISEQEKLYPL LTRHLETFEM WEALQVPIQP CQLGNQAGRL GAVWLAQQKL DRS
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