| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3903 |
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| Symbol | dppD |
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| ID | 6485676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3785893 |
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| End bp | 3786876 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642739165 |
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| Product | dipeptide transporter ATP-binding subunit |
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| Protein accession | YP_002042876 |
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| Protein GI | 194446179 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.721357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTAT TAAATGTAGA TCAATTATCG GTGCACTTCG GCGACGAAGG GACACCGTTC
AAAGCCGTCG ACCGCATTAG CTACAGCGTG AAGCAGGGTG AGGTGGTCGG TATTGTCGGC
GAGTCTGGTT CCGGCAAATC CGTCAGCTCG CTGGCGATTA TGGGGCTTAT CGATTACCCA
GGCCGCGTGA TGGCGGAAAA CCTGCTCTTT AACGGACAGG ATCTGAAGCG CATTTCCGAG
AAGGAACGTC GCAACCTGGT GGGCGCTGAA GTGGCGATGA TTTTCCAGGA CCCGATGACC
AGCCTCAATC CTTGCTATAC CGTTGGCTTT CAGATTATGG AAGCCATCAA GGTACATCAG
GGCGGGAACA AGAAAACTCG TCGTCAGCGA GCGATTGACC TGTTGAACCA AGTGGGCATT
CCCGATCCGG CCTCTCGTCT GGATGTCTAT CCGCATCAGC TTTCTGGCGG CATGAGTCAG
CGTGTGATGA TTGCGATGGC AATAGCCTGT CGACCAAAGC TGTTAATTGC CGATGAACCG
ACCACGGCGC TGGATGTGAC CATTCAGGCG CAAATTATTG AGCTGCTGCT GGAGTTGCAG
CAAAAAGAGA ACATGGCGCT GGTGCTGATT ACCCATGACC TGGCGCTGGT GGCGGAAGCG
GCGCACAAAA TTATCGTCAT GTACGCCGGG CAGGTCGTCG AAACCGGCGC TGCGCAGGAT
ATTTTCCGCG CGCCGCGTCA TCCGTATACC CAGGCATTGC TACGTGCGTT ACCAGAGTTT
GCGCAAGATA AAGCGCGTCT GGCGTCGCTG CCGGGCGTGG TGCCGGGGAA ATATGACCGA
CCGACGGGTT GTCTGCTTAA CCCTCGCTGC CCCTACGCCA CGGACAGATG TCGTGCGGAA
GAACCTGCTC TTAACCAACT GGACGATGGA CGTCAGTCAA AATGTCATTA CCCACTCGAT
GATGCCGGGA GGCCCACACT ATGA
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| Protein sequence | MALLNVDQLS VHFGDEGTPF KAVDRISYSV KQGEVVGIVG ESGSGKSVSS LAIMGLIDYP
GRVMAENLLF NGQDLKRISE KERRNLVGAE VAMIFQDPMT SLNPCYTVGF QIMEAIKVHQ
GGNKKTRRQR AIDLLNQVGI PDPASRLDVY PHQLSGGMSQ RVMIAMAIAC RPKLLIADEP
TTALDVTIQA QIIELLLELQ QKENMALVLI THDLALVAEA AHKIIVMYAG QVVETGAAQD
IFRAPRHPYT QALLRALPEF AQDKARLASL PGVVPGKYDR PTGCLLNPRC PYATDRCRAE
EPALNQLDDG RQSKCHYPLD DAGRPTL
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