Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3850 |
Symbol | |
ID | 6485931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3722778 |
End bp | 3723995 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642739115 |
Product | major facilitator superfamily transporter |
Protein accession | YP_002042826 |
Protein GI | 194445366 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 92 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAC CCGTCGCTGA ACCGGCGCTA AACGGATTGC GCCTCAATCT GCGTATTGTC TCCATCGTGA TGTTTAACTT TGCCAGCTAC CTGACTATCG GCCTGCCGCT CGCCGTCTTG CCCGGCTATG TGCATGATGC GATGGGATTC AGCGCGTTCT GGGCGGGGCT TATTATCAGC CTGCAATACT TCGCCACTCT GTTAAGCCGT CCCCATGCCG GGCGGTATGC GGATGTATTA GGGCCGAAAA AAATCGTTGT CTTTGGCTTA TGCGGCTGTT TTTTAAGCGG ACTCGGCTAC CTGCTGGCGG ATATCGCCAG CGCCTGGCCG ATGATCAGTT TGTTGCTACT GGGGCTGGGT CGCGTGATTT TGGGGATTGG GCAAAGTTTT GCCGGCACCG GTTCGACACT GTGGGGCGTC GGTGTCGTCG GGTCGTTGCA TATTGGTCGG GTCATCTCCT GGAACGGTAT CGTCACCTAC GGCGCAATGG CGATGGGCGC GCCGCTGGGC GTGCTGTGTT ATGCCTGGGG CGGGTTACAG GGGCTGGCGC TAACGGTGAT GGGCGTGGCG CTGTTCGCGA TACTGTTAGC GCTTCCACGT CCGTCGGTGA AAGCGAACAA AGGCAAGCCG CTACCGTTTC GCGCGGTGCT GGGGCGTGTC TGGCTGTATG GTATGGCGTT GGCGCTGGCC TCGGCAGGGT TTGGCGTCAT CGCGACGTTT ATTACCTTAT TTTATGATGC TAAAGGCTGG GATGGCGCCG CCTTTGCGCT CACGTTATTT AGCGTCGCGT TTGTCGGCAC GCGTTTGCTG TTCCCTAACG GCATCAATCG CTTAGGCGGG TTGAATGTCG CCATGATCTG CTTTGGCGTG GAGATTATTG GTCTGTTACT GGTGGGAACG GCAGCCATGC CGTGGATGGC AAAAATCGGC GTTTTACTCA CGGGGATGGG TTTTTCTCTG GTCTTTCCGG CGCTGGGCGT GGTGGCCGTC AAAGCCGTGC CGCCGCAGAA CCAGGGCGCG GCGCTGGCGA CCTATACCGT CTTTATGGAT ATGTCTTTGG GGGTTACCGG GCCGCTGGCG GGGCTGGTGA TGACCTGGGC GGGCGTGCCG GTGATTTATC TGGCGGCGGC CGGGCTGGTA GCGATGGCGC TATTGCTGAC CTGGCGCTTA AAAAAACGGC CTCCGTCTGC ACTGCCGGAG GCCGCATCAT CGTCGTAA
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Protein sequence | MPEPVAEPAL NGLRLNLRIV SIVMFNFASY LTIGLPLAVL PGYVHDAMGF SAFWAGLIIS LQYFATLLSR PHAGRYADVL GPKKIVVFGL CGCFLSGLGY LLADIASAWP MISLLLLGLG RVILGIGQSF AGTGSTLWGV GVVGSLHIGR VISWNGIVTY GAMAMGAPLG VLCYAWGGLQ GLALTVMGVA LFAILLALPR PSVKANKGKP LPFRAVLGRV WLYGMALALA SAGFGVIATF ITLFYDAKGW DGAAFALTLF SVAFVGTRLL FPNGINRLGG LNVAMICFGV EIIGLLLVGT AAMPWMAKIG VLLTGMGFSL VFPALGVVAV KAVPPQNQGA ALATYTVFMD MSLGVTGPLA GLVMTWAGVP VIYLAAAGLV AMALLLTWRL KKRPPSALPE AASSS
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