Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3788 |
Symbol | |
ID | 6483606 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3655198 |
End bp | 3657591 |
Gene Length | 2394 bp |
Protein Length | 797 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642739055 |
Product | maltodextrin phosphorylase |
Protein accession | YP_002042766 |
Protein GI | 194445591 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0058] Glucan phosphorylase |
TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 105 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAGC CAACCTTCAA TAAAGATCAA TTCCAGGCCG CCCTGACGCG TCAGTGGCAG CGTTTCGGTT TACTGTCGGC GTCCGACATG ACGCCTCGTC AGTGGTGGCA GGCCGTTAGC GGCGCGCTGG CGGAATTACT GAGCGCGCAA CCGGTAGCGC AGCCGACGAA AGGCCAGCGT CATGTGAACT ACATTTCGAT GGAATTTTTG ATTGGCCGCC TGACGGGAAA TAACCTGTTA AATCTGGGGT GGTACCAGGA CGTTAGCGAT GTGCTGAAAG CGCACGATAT TAATCTGACC GATCTGCTGG AAGAGGAAGT CGATCCGGCG CTCGGCAACG GTGGTCTGGG ACGTCTGGCC GCCTGCTTCC TCGATTCGAT GGCCACCGTC GGGCAGTCCG CTACGGGCTA TGGTCTGAAC TACCAGTATG GGCTGTTCCG TCAGTCATTT GTTGAAGGCA AGCAGATGGA GGCGCCGGAT GACTGGCATC GCGGCAGCTA TCCGTGGTTC CGCCACAACG AGGCGCTGGA CGTCCAGGTT GGGATCGGCG GTAAAGTCAC CAAAGAAGGG CGCTGGGAGC CAGGTTTTGT GATTACAGGC CAGGCCTGGG ATCTGCCGGT GTTAGGCTAT CGTAACGGCG TCGCGCAACC GCTGCGTTTG TGGCAGGCGA CCCACGCCCA TCCGTTTGAT CTGACCAAAT TCAACGACGG CGCTTTCCTG CGGGCGGAAC AGCAGGGTAT CGATGCGGAA AAACTGACGA AGGTGCTTTA TCCCAACGAT AACCACACGG CGGGCAAAAA ACTGCGCCTG ATGCAGCAAT ACTTCCAGTG CGCCTGCTCG GTAGCGGATA TTCTGCGTCG CCATCATCTG GCCGGACGCA AACTGCATGA GCTGGCGGAT TACGAGGTCA TTCAGTTGAA CGATACTCAC CCGACCATCG CCATTCCGGA ACTGCTGCGC GTGCTGATTG ACGAGCACCA GCTGAGCTGG GATGACGCCT GGGCTATCAC CAGCAAAACC TTCGCCTACA CCAACCACAC CCTGATGCCA GAAGCGCTGG AGTGCTGGGA TGAGAGGTTA ATCAAAGCGC TGTTGCCGCG TCATATGCAG ATTATCAAGC AGATTAATGA TCGCTTTAAG ACGCTGGTCG ATAAGACCTG GCCTGGCGAT AAGCAGGTAT GGGCAAAACT GGCGGTGGTG CATGACCGTC AGGTGCGCAT GGCCAATATG TGCGTGGTCA GCGGCTTTGC GGTCAACGGT GTGGCGGCGC TGCACTCCGA TCTGGTGATG AAAGATCTGT TCCCGGAATA TCACCAGCTT TGGCCGAACA AATTCCACAA TGTCACCAAC GGCATTACGC CGCGTCGCTG GATCAAACAG TGCAATCCGC AGCTTGCGGC GTTGCTGGAT AAAACGCTGA AAAAAGAGTG GGCTAACGAT CTCGACCAGT TGATCAACCT CGAAAAATAC GCTGACGACG CCAAATTCCG TCAGCAATAT CGCGACATCA AACGGGCGAA CAAAGAACGG CTGGTGAAAT TCATCCAGGC CCGTACCGGG ATTGAGATTT CGAGCCATGC GATTTTTGAT ATTCAGATCA AACGCCTGCA CGAGTACAAG CGTCAGCACC TGAACCTGTT GCATATTCTG GCGCTGTACA AAGAGATTCG CGAAAACCCG CAGGCTGACC GCGTACCGCG CGTATTCCTG TTTGGCGCGA AGGCGGCGCC GGGCTATTAC CTGGCGAAGA ACATCATTTT TGCTATCAAT AAGGTTGCGG AAGCCATTAA TAACGACCCG GCGGTGGGTG ATAAGCTGAA GGTGGTTTTC CTGCCGGATT ACTGCGTCTC GGCGGCGGAA ATGCTCATTC CGGCGGCGGA TATTTCCGAG CAAATTTCTA CTGCCGGGAA AGAGGCGTCC GGCACTGGCA ACATGAAACT GGCGCTGAAC GGGGCGTTGA CAGTGGGAAC GCTGGACGGC GCTAACGTTG AAATCGCTGA AAAGGTGGGT GAAGAGAATA TCTTTATCTT TGGCCATACT GTGGAAGAGG TCAAGGCGCT CAAAGCCAAA GGCTACGATC CGGTGAAATG GCGTAAAAAA GACAAAGTGC TGGATGCGGT GCTAAAAGAG CTGGAAAGCG GTCAATACAG CGATGGCGAT AAACATGCCT TTGACCAGAT GCTGCATAGC CTCGGCAAAC AGGGGGGCGA TCCGTACCTG GTCATGGCGG ACTTCGCCGC TTATGTCGAG GCGCAAAAGC AGGTGGATGC GCTGTATCGT GACCAGGAAG CGTGGACGCG CGCCGCGATC CTCAATACCG CGCGCTGCGG TATGTTCAGT TCCGATCGCT CTATTCGCGA TTATCAGGCC CGTATCTGGC AGGCAAAACG CTAA
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Protein sequence | MSQPTFNKDQ FQAALTRQWQ RFGLLSASDM TPRQWWQAVS GALAELLSAQ PVAQPTKGQR HVNYISMEFL IGRLTGNNLL NLGWYQDVSD VLKAHDINLT DLLEEEVDPA LGNGGLGRLA ACFLDSMATV GQSATGYGLN YQYGLFRQSF VEGKQMEAPD DWHRGSYPWF RHNEALDVQV GIGGKVTKEG RWEPGFVITG QAWDLPVLGY RNGVAQPLRL WQATHAHPFD LTKFNDGAFL RAEQQGIDAE KLTKVLYPND NHTAGKKLRL MQQYFQCACS VADILRRHHL AGRKLHELAD YEVIQLNDTH PTIAIPELLR VLIDEHQLSW DDAWAITSKT FAYTNHTLMP EALECWDERL IKALLPRHMQ IIKQINDRFK TLVDKTWPGD KQVWAKLAVV HDRQVRMANM CVVSGFAVNG VAALHSDLVM KDLFPEYHQL WPNKFHNVTN GITPRRWIKQ CNPQLAALLD KTLKKEWAND LDQLINLEKY ADDAKFRQQY RDIKRANKER LVKFIQARTG IEISSHAIFD IQIKRLHEYK RQHLNLLHIL ALYKEIRENP QADRVPRVFL FGAKAAPGYY LAKNIIFAIN KVAEAINNDP AVGDKLKVVF LPDYCVSAAE MLIPAADISE QISTAGKEAS GTGNMKLALN GALTVGTLDG ANVEIAEKVG EENIFIFGHT VEEVKALKAK GYDPVKWRKK DKVLDAVLKE LESGQYSDGD KHAFDQMLHS LGKQGGDPYL VMADFAAYVE AQKQVDALYR DQEAWTRAAI LNTARCGMFS SDRSIRDYQA RIWQAKR
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