| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3784 |
|---|
| Symbol | |
|---|
| ID | 6486571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011080 |
|---|
| Strand | + |
|---|
| Start bp | 3649981 |
|---|
| End bp | 3650664 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642739051 |
|---|
| Product | gluconate periplasmic binding protein |
|---|
| Protein accession | YP_002042762 |
|---|
| Protein GI | 194445852 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | [TIGR00201] comF family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 106 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAACAG TACCGGGATT ATGCTGGCTA TGCCGAATGC CGCTGGCGTT AAGCCACTGG
GGGATTTGTT CCGTATGCGC GCGCGCCGTC CGCCAGCGCG TCAGCGTGTG TCCGCAATGT
GGATTACCCG CCAGGCATCC TTCGCTCCCC TGCGGTCGCT GCCTGCAAAA ACCGCCGCCC
TGGCAGCGTC TGGTAAGCGT CAGTAACTAT ACGCCGCCCT TGAGTTTACT GGTGCATCAG
CTTAAATTTA CCCGCCGTAA CGAAATTGCC GCCGCTCTGG CGCGTCTACT GTTGCAGGAA
GTCCTCATGG CGCGCCGCAG CACTGGCTTG CAGCTTCCCG ACAGAATCGT CAGCGTTCCG
CTCTGGTCGC GCCGACACTG GCGGCGGGGA TTTAACCAAA GCGATCTGTT ATGCCAACCG
TTAGCGCACT GGCTGGGCTG CGCGTGGGAC AGCCAGACCA TCACGCGGGT ACGGGCGACC
GTAACACAAC ATCATCTCAG CGCCAGGTTA CGGAAACGCA ATTTGAAAAA CGCGTTTCGC
CTTGAATTGC CGGTACAGGG TCTCCATATG GTTATTGTGG ATGATGTCGT CACTACCGGA
AGTACCGTCG CGGAAATCGC GCAACTGCTT TTGCGCAACG GCGCAGCGAC TGTCCAGGTA
TGGTGCCTGT GTCGAACCTT GTAG
|
|---|
| Protein sequence | MLTVPGLCWL CRMPLALSHW GICSVCARAV RQRVSVCPQC GLPARHPSLP CGRCLQKPPP
WQRLVSVSNY TPPLSLLVHQ LKFTRRNEIA AALARLLLQE VLMARRSTGL QLPDRIVSVP
LWSRRHWRRG FNQSDLLCQP LAHWLGCAWD SQTITRVRAT VTQHHLSARL RKRNLKNAFR
LELPVQGLHM VIVDDVVTTG STVAEIAQLL LRNGAATVQV WCLCRTL
|
|---|
| |