Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3765 |
Symbol | mrcA |
ID | 6482442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3627934 |
End bp | 3630486 |
Gene Length | 2553 bp |
Protein Length | 850 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642739032 |
Product | peptidoglycan synthetase |
Protein accession | YP_002042743 |
Protein GI | 194446165 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 85 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAGTTCG TAAAGTATTT ATTGATCCTT GCAGTATGTT GCATCCTGCT GGGAGCAGGC TCGATTTATG GCCTTTATCG CTATATTGAG CCACAGCTAC CTGACGTCGC GACATTGAAA GATGTGCGTT TGCAAATTCC GATGCAGGTT TACAGCGCGG ATGGCGAACT TATCGCGCAA TATGGCGAAA AACGTCGTAT TCCCGTTACG CTCGATCAAA TTCCGCCGGA AATGATCAAC GCCTTTATCG CCACCGAAGA TAGCCGCTTT TATGAGCATC ACGGCATTGA CCCGGTAGGT ATTTTCCGTG CGGCCAGCGT CGCGCTCTTC TCCGGTCACG CATCGCAGGG AGCAAGTACC ATTACCCAGC AACTGGCGCG AAACTTCTTC CTTAGCCCCG AACGCACGCT GATGCGCAAG ATCAAGGAAG CGTTTCTGGC GATTCGTATT GAGCAGTTGC TGAATAAAAA TGAGATCCTC GAACTCTATC TGAACAAGAT CTATCTCGGC TACCGCGCCT ATGGCGTTGG CGCGGCGGCA CAGGTCTACT TTGGTAAGAC GGTCGACCAG CTTAGTCTAA GCGAAATGGC GGTCATCGCC GGGCTACCGA AAGCGCCTTC TACCTTTAAC CCGCTCTACT CGATGGATCG GGCGGTGGCG CGCCGTAACG TAGTGCTCTC GCGAATGTTA AGCGAGGGAT ATATCACTCA GGCGCAGTAC GATCAGGCCC GTAGCGAACC TATCGACGCA AATTATCACG CGCCGGAAAT CGCCTTCTCC GCGCCTTATC TGTCGGAAAT GGTGCGCCAG GAAATGTATA ACCGTTATGG CGAAAGCGCC TACGAAGATG GTTATCGTAT TTACACGACC ATCACCCGCA AAGTGCAGCA GGCCGCGCAA CAGGCGGTGC GTAATAACGT GCTGGACTAT GACATGCGCC ACGGTTATCG CGGCCCGGCG AATGTGCTAT GGAAAGTGGG CGAAACGGCG TGGGACAGTA AAAAAATTAC CGATACGTTG AAAGCGTTAC CGACCTACGG ACCGCTGCTT CCCGCCGTGG TCACCAGCGC TAATCCGCAA GAGGCGACCG CTGCGCTTGC CGACGGTACG TCCGTTTCGC TACATATGGA AGGAATGCGT TGGGCGCGGC CTTACCGCTC GGATACACAG CAGGGGCCGA CGCCGCGTAA AGTTACCGAT GTCGTCCAGA CAGGTCAGCA AATCTGGGTT CGTCAGGTGG ATAACGACTG GTGGCTGGCG CAGGTACCGG AAGTGAACTC CGCGCTGGTT TCGCTTAACC CGCAAACAGG CGCGGTAATG GCGCTGGTCG GCGGTTTCGA TTTTAATCAG AGTAAATTTA ACCGCGCGAC GCAAGCTTTG CGTCAGGTGG GGTCGAACAT CAAACCGTTC CTCTACACCG CCGCAATGGA TAAAGGGCTG ACGCTCGCCA GTATGCTCAA CGATGTGCCG ATTTCCCGCT GGGACGCCGG GGCAGGTTCA GACTGGCGTC CGAAAAACTC CCCGCCGCAG TACGCCGGAC CGATTCGTTT ACGCCAGGGG CTGGGGCAGT CGAAAAACGT GGTGATGGTA CGCGCCATGC GCGCCATGGG CGTCGACTAT GCGGCGGAGT ATTTGCAACG CTTCGGCTTC CCGGCGCAGA ATATCGTGCA TACCGAATCG CTGGCGCTGG GCTCCGCCTC CTTCACGCCG ATGCAGGTTG CGCGCGGTTA TGCGGTGATG GCGAACGGCG GTTTCCTGAT CGACCCGTAT TTCATCAGCA AGATTGAGAA CGATCAGGGC GGCGTGATCT TCGAAGCGAA ACCGAAAATC GCCTGCCCGG AGTGCGATAT CCCGGTCATT TACGGCAATA CGCAGAAATC CGACGTGCTG GAAAACACCA ATGTGGAAGA GGTCGCGGTT TCGCAAGAGC AGCAAAACAG CGCCGTACCG ATGCCTGAGC TGGAACAGGC AAACCAGGCG CTGGTCGCGC AAAACGGCAC GCAGGAGTAC GCGCCGCATG TGATCAATAC GCCGCTGGCG TTTCTGATTA AAAGCGCGCT GAACACCAAT ATCTTCGGCG AACCCGGCTG GATGGGTACC GGCTGGCGTG CGGCGCGTGA CCTTAAACGT CGCGATATCG GCGGCAAAAC CGGTACAACC AACAGCTCGA AAGACGCATG GTTCTCCGGC TATGGCCCTG GCGTCGTCAC TTCCGTATGG ATCGGCTTTG ACGATCACCG CCGTGATTTA GGCCGCACTA CCGCTTCCGG CGCGATCAAA GATCAAATCT CCGGCTATGA GGGCGGCGCG AAGAGCGCGC AACCTGCATG GGACGCCTAT ATGAAAGCCG TACTGGAAGG CGTGCCGGAA CAGCCGCTAA CGCCGCCGCC GGGCATCGTC ACGGTGAATA TCGACCGCAG TACCGGACAA CTGGCGAGCG GCGGTAATAG CCGTGAAGAG TATTTCATCG AAGGCACGCA GCCGACACAA CAGGCGGTAC ACGAGGTGGG AACTACCATT ATTGATAATG GTGAAACACA CGAACTGTTC TGA
|
Protein sequence | MKFVKYLLIL AVCCILLGAG SIYGLYRYIE PQLPDVATLK DVRLQIPMQV YSADGELIAQ YGEKRRIPVT LDQIPPEMIN AFIATEDSRF YEHHGIDPVG IFRAASVALF SGHASQGAST ITQQLARNFF LSPERTLMRK IKEAFLAIRI EQLLNKNEIL ELYLNKIYLG YRAYGVGAAA QVYFGKTVDQ LSLSEMAVIA GLPKAPSTFN PLYSMDRAVA RRNVVLSRML SEGYITQAQY DQARSEPIDA NYHAPEIAFS APYLSEMVRQ EMYNRYGESA YEDGYRIYTT ITRKVQQAAQ QAVRNNVLDY DMRHGYRGPA NVLWKVGETA WDSKKITDTL KALPTYGPLL PAVVTSANPQ EATAALADGT SVSLHMEGMR WARPYRSDTQ QGPTPRKVTD VVQTGQQIWV RQVDNDWWLA QVPEVNSALV SLNPQTGAVM ALVGGFDFNQ SKFNRATQAL RQVGSNIKPF LYTAAMDKGL TLASMLNDVP ISRWDAGAGS DWRPKNSPPQ YAGPIRLRQG LGQSKNVVMV RAMRAMGVDY AAEYLQRFGF PAQNIVHTES LALGSASFTP MQVARGYAVM ANGGFLIDPY FISKIENDQG GVIFEAKPKI ACPECDIPVI YGNTQKSDVL ENTNVEEVAV SQEQQNSAVP MPELEQANQA LVAQNGTQEY APHVINTPLA FLIKSALNTN IFGEPGWMGT GWRAARDLKR RDIGGKTGTT NSSKDAWFSG YGPGVVTSVW IGFDDHRRDL GRTTASGAIK DQISGYEGGA KSAQPAWDAY MKAVLEGVPE QPLTPPPGIV TVNIDRSTGQ LASGGNSREE YFIEGTQPTQ QAVHEVGTTI IDNGETHELF
|
| |