Gene SNSL254_A3733 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3733 
Symbol 
ID6486449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3594697 
End bp3595719 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content56% 
IMG OID642739002 
Productputative hydrolase 
Protein accessionYP_002042713 
Protein GI194443559 
COG category[R] General function prediction only 
COG ID[COG0429] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.805854 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.0665077 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAGA TCACGTCCAC AGAAATGACC CCGCCTGTCA ATGACTCGCA TGAATTTATT 
CCCATGCGTG GCATTCGTAA TCGCCATTTA CAAACTATGC TGCCGCGTTT AATCCGCCGC
AAAGTGAAGT TCAACGCCCA CTGGCAGCGG CTGGAGCTAC CGGACGGCGA TTTTGTCGAT
CTGGCATGGA GCGAAGATCC GCAACAGGCA CAGCATAAAC CGCGGCTGGT GGTCTTTCAC
GGTCTGGAAG GCAGCCTGAA CAGCCCCTAT GCCCACGGGC TGATTGAGGC GGCGCAAAAG
CGCGGCTGGC TGGGCGTGGT GATGCACTTT CGCGGCTGTA GCGGCGAGCC CAACCGTCTG
AATCGTATTT ACCACTCCGG TGAAACGGAG GATGGAGCCT GGTTTTTACG CTGGCTACAG
CGGGAGTTCG GCGCCGTTCC GACAGCCGCC GTGGGCTATT CGCTCGGCGG TAATATGCTG
GCGTGCCTGC TGGCGAAAGA AGGCCGCGAT ATTCCCATCG AGGCGGCGGT AATTGTTTCT
GCACCTTTCG TTCTCGAAGC CTGTAGCTAC CACATGGACA AAGGGTTTTC CCGCGTCTAT
CAGCGTTATT TGCTTAATCT GTTAAAAGCG AATGCGTCAC GCAAGCTGGC GGCGTACCCC
GGGTCGCTGC CGGTGAATCT GGCGCAACTG AAATCAATGC GCCGTATTCG CGAGTTTGAC
GACCTGATCA CCGCGAAAAT TCACGGCTTT GCCGACGCCA TCGACTACTA TCGTCAGTGT
AGCGCCATGC CGTTGCTTAA CCAGATTGCT AAACCGACGC TGATTATTCA CGCTAAAGAC
GATCCGTTTA TGGATCATCA TGTGATCCCT AAAGCGGAAG ATCTGCCCCC GCAGGTGGAG
TATCAGCTGA CTGAGCATGG CGGACACGTA GGATTTATCG GCGGTACGCC GCTGCGCCCT
GAAATGTGGC TGGAACGCCG AATTCCTGAC TGGCTGACAA CGTACCTGGA GGCGTCATCA
TGA
 
Protein sequence
MVEITSTEMT PPVNDSHEFI PMRGIRNRHL QTMLPRLIRR KVKFNAHWQR LELPDGDFVD 
LAWSEDPQQA QHKPRLVVFH GLEGSLNSPY AHGLIEAAQK RGWLGVVMHF RGCSGEPNRL
NRIYHSGETE DGAWFLRWLQ REFGAVPTAA VGYSLGGNML ACLLAKEGRD IPIEAAVIVS
APFVLEACSY HMDKGFSRVY QRYLLNLLKA NASRKLAAYP GSLPVNLAQL KSMRRIREFD
DLITAKIHGF ADAIDYYRQC SAMPLLNQIA KPTLIIHAKD DPFMDHHVIP KAEDLPPQVE
YQLTEHGGHV GFIGGTPLRP EMWLERRIPD WLTTYLEASS