| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3710 |
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| Symbol | rpsJ |
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| ID | 6485205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3578236 |
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| End bp | 3578547 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642738980 |
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| Product | ribosomal protein S10 |
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| Protein accession | YP_002042691 |
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| Protein GI | 194443646 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000120586 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 0.692874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGAACC AAAGAATCCG TATCCGCCTG AAAGCGTTTG ATCATCGTCT GATCGATCAA
TCAACCGCGG AAATCGTCGA GACTGCCAAG CGCACTGGTG CGCAGGTTCG CGGTCCGATC
CCGCTGCCGA CCCGCAAAGA GCGCTTTACC GTTCTGATCT CTCCGCACGT TAACAAAGAT
GCGCGCGATC AGTACGAAAT TCGCACTCAC AAGCGTCTGG TTGACATCGT TGAGCCAACC
GAGAAAACCG TTGATGCTCT GATGCGTCTG GACCTGGCTG CCGGTGTAGA CGTGCAGATC
AGCCTGGGTT AA
|
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| Protein sequence | MQNQRIRIRL KAFDHRLIDQ STAEIVETAK RTGAQVRGPI PLPTRKERFT VLISPHVNKD
ARDQYEIRTH KRLVDIVEPT EKTVDALMRL DLAAGVDVQI SLG
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