Gene SNSL254_A3679 details

Gene Information

• Locus tag: SNSL254_A3679
• Symbol: mscL
• ID: 6483566
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salmonella enterica subsp. enterica serovar Newport str. SL254
• Kingdom: Bacteria
• Replicon accession: NC_011080
• Strand: +
• Start bp: 3563306
• End bp: 3563719
• Gene Length: 414 bp
• Protein Length: 137 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 642738951
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_002042662
• Protein GI: 194446402
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 94
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTTTTA TTAAAGAATT TCGCGAATTC GCGATGCGCG GAAATGTTGT GGATTTGGCA 
GTGGGTGTCA TTATTGGCGC GGCATTCGGT AAGATTGTTT CTTCACTGGT TGCCGATATT 
ATTATGCCGC CGTTGGGATT GTTAATCGGC GGGATCGACT TTAAACAATT TGCTTTTACG 
TTACGCGAAG CGCAGGGAGA TATTCCGGCG GTCGTCATGC ATTACGGCGT GTTTATCCAG 
AACGTATTTG ATTTTGTGAT TGTGGCCTTT GCTATCTTTG TTGCCATTAA GCTTATCAAC 
AGACTCAACC GTAAAAAAGC AGAAGAGCCG GCAGCTCCGC CAGCGCCTTC TAAAGAGGAA 
GTGTTATTGG GCGAAATCCG CGATCTGCTG AAAGAACAAA ATAACCGTTC TTAA 

 

Protein sequence

MSFIKEFREF AMRGNVVDLA VGVIIGAAFG KIVSSLVADI IMPPLGLLIG GIDFKQFAFT 
LREAQGDIPA VVMHYGVFIQ NVFDFVIVAF AIFVAIKLIN RLNRKKAEEP AAPPAPSKEE 
VLLGEIRDLL KEQNNRS