Gene SNSL254_A3676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3676 
Symbolfmt 
ID6484575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3559478 
End bp3560425 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content55% 
IMG OID642738948 
Productmethionyl-tRNA formyltransferase 
Protein accessionYP_002042659 
Protein GI194442945 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0223] Methionyl-tRNA formyltransferase 
TIGRFAM ID[TIGR00460] methionyl-tRNA formyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones82 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGATT CACTACGTAT TATTTTTGCG GGTACACCTG ACTTTGCAGC GCGTCATCTC 
GACGCGCTGT TAACTTCTGG ACATAACGTT GTCGGCGTAT TTACCCAACC CGATCGTCCA
GCAGGTCGCG GCAAAAAGTT GATGCCCAGC CCGGTAAAAG TGCTGGCGGA AGAAAAAGGC
CTGCCCGTTT TCCAGCCCGT GTCGCTTCGT CCTCAGGAAA ACCAGCATCT GGTGGCTGAC
TTACATGCCG ACGTCATGGT TGTCGTAGCA TATGGTCTGA TTCTCCCAAA GGCAGTGCTG
GATATGCCCC GTCTCGGATG TATCAACGTT CACGGTTCGC TGCTTCCACG CTGGCGCGGC
GCGGCGCCTA TTCAGCGCTC ACTCTGGGCA GGCGATGCGG AAACCGGCGT CACAATTATG
CAGATGGATG TAGGGCTGGA TACCGGCGAC ATGCTGTATA AACTTGCGTG CCCGATTACC
GCAGAAGATA CCAGTGGCTC ACTGTATAAT AAGTTGGCTG AACTTGGCCC GCAGGGGTTA
ATTACCACAC TAAAACAACT GGCGGACGGC ACAGCGACGC CTGAAGCGCA GAATGAAGCG
CTGGTCACTC ATGCGGAAAA GCTCAGTAAA GAAGAAGCGC GTATTGACTG GTCTCTCTCC
GCAGCACAGC TGGAGCGTTG CATTCGCGCC TTTAATCCGT GGCCAATGAG CTGGCTGGAA
ATCGACGGCC AGCCGGTAAA AGTCTGGCAG GCGTCCGTCA TTGAGGACGC CACGCAGTCG
CTGCCGGGAA CCATTCTGGC CGCGACGAAA CAGGGCATTC AGGTTGCAAC AGGCAAGGGG
ATATTAAATT TGCTTTCGCT TCAGCCTGCC GGCAAAAAAG CGATGAGCGC CCAGGATCTG
TTAAATTCAC GCCGGGAATG GTTTATTCCT GGTAACCGTC TTGCCTGA
 
Protein sequence
MSDSLRIIFA GTPDFAARHL DALLTSGHNV VGVFTQPDRP AGRGKKLMPS PVKVLAEEKG 
LPVFQPVSLR PQENQHLVAD LHADVMVVVA YGLILPKAVL DMPRLGCINV HGSLLPRWRG
AAPIQRSLWA GDAETGVTIM QMDVGLDTGD MLYKLACPIT AEDTSGSLYN KLAELGPQGL
ITTLKQLADG TATPEAQNEA LVTHAEKLSK EEARIDWSLS AAQLERCIRA FNPWPMSWLE
IDGQPVKVWQ ASVIEDATQS LPGTILAATK QGIQVATGKG ILNLLSLQPA GKKAMSAQDL
LNSRREWFIP GNRLA