Gene SNSL254_A3603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3603 
Symbol 
ID6485407 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp3491205 
End bp3491987 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content53% 
IMG OID642738879 
Producttranscriptional regulator NanR 
Protein accessionYP_002042596 
Protein GI194443824 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.445383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones85 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTT TTGATTCGCA AGCAGAAGAT TCTCCGACAT CCCTCGGGCG TAGTTTGCGC 
CGCCGCCCGC TGGCGCGTAA AAAACTGTCT GAAATGGTTG AGGAAGAGCT GGAGCAGATG 
ATCCGCCGTC ATGAGTTTGG CGAGGGAGAA CAGCTACCGT CTGAACGTGA ATTAATGGCC 
TTCTTCAATG TGGGACGTCC CTCCGTGCGT GAAGCGTTAG CTGCGCTGAA GCGTAAAGGT 
CTGGTGCAAA TCAATAACGG CGAACGCGCC CGCGTCTCGC GCCCCTCTGC TGATACCATC 
ATCAGTGAAC TGTCGGGTAT GGCGAAAGAT TTTCTTACTC ATCCTGGCGG CATCGCTCAC 
TTTGAACAGC TACGGCTTTT CTTTGAATCC AGCCTGGTAC GCTATGCGGC GGAACATGCC 
ACCGACGAGC AGATCGCGTT GTTAGCGAAA GCGCTGGAAA TTAATAGCCA GTCGCTGGAT 
GACAACGCGC TGTTTATTCG TTCGGATGTC GAGTTTCACC GGGTGCTGGC TGAAATTCCC 
GGCAATCCGA TCTTTATGGC TATTCATGTT GCTCTGCTGG ACTGGCTAAT CGCCGCTCGC 
CCAAGCGTTC CCGATCGTGA GCTGCATGAA CATAATAACG TGAGTTATCA ACAGCATATT 
GTGATTGTTG ATGCCATTCG CCAGCGAGAT CCCGATAAAG CGGATCGCGC TCTGCAAACC 
CACCTCAATA GCGTTTCCGC TACCTGGCAC GCACTCGGTA AAAAAAGTCA AAAAATGCGG 
TAG
 
Protein sequence
MNAFDSQAED SPTSLGRSLR RRPLARKKLS EMVEEELEQM IRRHEFGEGE QLPSERELMA 
FFNVGRPSVR EALAALKRKG LVQINNGERA RVSRPSADTI ISELSGMAKD FLTHPGGIAH 
FEQLRLFFES SLVRYAAEHA TDEQIALLAK ALEINSQSLD DNALFIRSDV EFHRVLAEIP 
GNPIFMAIHV ALLDWLIAAR PSVPDRELHE HNNVSYQQHI VIVDAIRQRD PDKADRALQT 
HLNSVSATWH ALGKKSQKMR