Gene SNSL254_A3582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3582 
SymbolyfiA 
ID6483049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp3467925 
End bp3468212 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content46% 
IMG OID642738862 
Productputative sigma(54) modulation protein 
Protein accessionYP_002042579 
Protein GI194443710 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1544] Ribosome-associated protein Y (PSrp-1) 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTCA ATATCACCGG ACATAATGTC GAAATTACTG AAGCCCTGCG TGAATTTGTG 
ACGACAAAAT TCGCCAAACT TGAACAGTAT TTTGAGCGGA TTAATCAGGT ATACGTGGTG
TTGAAAGTGG AGAAGGTCAC GCATATCTCG GATGCGACGC TACACGTTAA CGGCGGCGAA
ATTCACGCCA GCGCGGAAGG CCAGGATATG TATGCCGCCA TTGACGGCTT GATTGATAAA
CTGGCAAGGC AGTTAACCAG GCATAAAGAT AAACTGAAAC AACACTAA
 
Protein sequence
MQLNITGHNV EITEALREFV TTKFAKLEQY FERINQVYVV LKVEKVTHIS DATLHVNGGE 
IHASAEGQDM YAAIDGLIDK LARQLTRHKD KLKQH