| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3565 |
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| Symbol | rplU |
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| ID | 6483831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | - |
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| Start bp | 3454837 |
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| End bp | 3455148 |
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| Gene Length | 312 bp |
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| Protein Length | 103 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642738845 |
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| Product | 50S ribosomal protein L21 |
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| Protein accession | YP_002042562 |
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| Protein GI | 194442532 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0261] Ribosomal protein L21 |
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| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00265959 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 78 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACGCGG TTTTCCAAAG TGGTGGTAAA CAACACCGAG TAAGCGAAGG TCAGACCGTT
CGCCTGGAAA AGCTGGACAT CGCAACTGGC GAAACTATCG AGTTCGCTGA AGTTCTGATG
ATCGCAAACG GTGAAGAAGT CAAAATCGGC GTTCCTTTCG TTGATGGCGG CGTAATCAAA
GCTGAAGTTG TTGCCCACGG TCGTGGCGAG AAAGTTAAAA TCGTTAAGTT TCGTCGCCGT
AAACACTACC GTAAGCAGCA GGGCCATCGT CAGTGGTTCA CTGATGTGAA AATTACCGGC
ATCAGCGCTT AA
|
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| Protein sequence | MYAVFQSGGK QHRVSEGQTV RLEKLDIATG ETIEFAEVLM IANGEEVKIG VPFVDGGVIK
AEVVAHGRGE KVKIVKFRRR KHYRKQQGHR QWFTDVKITG ISA
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