Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3562 |
Symbol | obgE |
ID | 6486535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3452277 |
End bp | 3453449 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642738842 |
Product | GTPase ObgE |
Protein accession | YP_002042559 |
Protein GI | 194444474 |
COG category | [R] General function prediction only |
COG ID | [COG0536] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR02729] Obg family GTPase CgtA |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.238363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 83 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTTG TTGATGAAGC ATCGATTCTG GTCGTTGCAG GCGATGGCGG TAATGGCTGT GTGAGCTTCC GCCGCGAAAA ATATATCCCG AAAGGCGGCC CGGACGGCGG TGATGGCGGC GACGGCGGCG ACGTCTGGAT GGAAGCCGAT GAAAACCTGA ATACGCTGAT CGATTACCGC TTTGAAAAAT CGTTCCGCGC TGAACGTGGT CAGAATGGCG CGAGCCGCGA CTGTACCGGT AAACGCGGTA AAGACGTGAC CATCAAAGTG CCGGTCGGTA CGCGCGTTAT CGACCAGGGA ACCGGTGAAA CGATGGGCGA CATGACCAAA CACGGTCAGC GTCTGTTGGT CGCGAAGGGC GGCTGGCATG GGTTAGGCAA TACCCGTTTT AAATCCTCGG TTAACCGTAC GCCGCGCCAG AAAACCAATG GTACGCCGGG CGATAAGCGC GACCTGCTGC TGGAACTGAT GCTGCTGGCG GATGTCGGGA TGCTGGGGAT GCCAAACGCC GGTAAATCAA CGTTCATTCG CGCGGTATCG GCAGCAAAAC CGAAAGTCGC GGACTATCCG TTTACCACGC TGGTGCCGAG CCTGGGCGTG GTACGTATGG ACAGCGAAAA GAGTTTTGTG GTGGCCGACA TTCCGGGGTT GATCGAAGGC GCGGCGGAAG GCGCGGGCCT GGGGATTCGC TTCCTGAAGC ACCTCGAACG TTGCCGCGTA CTGCTGCACC TCATTGATAT CGATCCGATC GACGGTTCCG ATCCGGTGGA AAACGCCCGT ATCATTATTG GCGAACTGGA AAAATACAGC CAGGATCTGG CGGCTAAACC GCGCTGGTTA GTGTTCAACA AGATCGATCT GATGGATAAA ACCGAAGCGG AAGAGAAAGC GAAAGCGATC GCCGAAGCGT TGGGCTGGGA AGGGAAATAC TATCTGATTT CCGCCGCCAG CCAGCTAGGG GTGAAAGATC TCTGCTGGGA TGTGATGACC TTTATCATCG AGAATCCGAT CGCGCAGGCT GAAGAAGCAA AACAGCCGGA AAAAGTCGAG TTCATGTGGG ACGATTATCA TCGTCAGCAG TTGGCTGAAG TGGAAGAAGA CGCAGACGAT GACTGGGATG ACGACTGGGA TGAAGACGAC GAAGAAGGCG TCGAGTTCAT CTACAAACGT TAA
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Protein sequence | MKFVDEASIL VVAGDGGNGC VSFRREKYIP KGGPDGGDGG DGGDVWMEAD ENLNTLIDYR FEKSFRAERG QNGASRDCTG KRGKDVTIKV PVGTRVIDQG TGETMGDMTK HGQRLLVAKG GWHGLGNTRF KSSVNRTPRQ KTNGTPGDKR DLLLELMLLA DVGMLGMPNA GKSTFIRAVS AAKPKVADYP FTTLVPSLGV VRMDSEKSFV VADIPGLIEG AAEGAGLGIR FLKHLERCRV LLHLIDIDPI DGSDPVENAR IIIGELEKYS QDLAAKPRWL VFNKIDLMDK TEAEEKAKAI AEALGWEGKY YLISAASQLG VKDLCWDVMT FIIENPIAQA EEAKQPEKVE FMWDDYHRQQ LAEVEEDADD DWDDDWDEDD EEGVEFIYKR
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