Gene SNSL254_A3550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A3550 
Symbol 
ID6482770 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp3442412 
End bp3443476 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content47% 
IMG OID642738830 
Productputative cytoplasmic protein 
Protein accessionYP_002042548 
Protein GI194445377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.433804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones98 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAT TTTTCGATCG TGCTGGATTG ATTGCTGAAT TGCGCAAATC CAATTTGAGC 
TCTGCTATTC AGGAGAAAGT CGTGCAACAG GCACGTGCTG CTATTGCATT TAAACGTTGT 
CTGCGGGATA TGGAAACAGT AAAGGTGGGG GCATCGCGGT TGGGCGGTCT ACCCGACTGG 
CCATTAGGAC AAAGCTGGCC TATACGAAAA AAATCGGTTA ATGCCACATC TCGCGTACTA 
AAGCTGAAAG CTGAAAAAAC GCGAAATGCC AGGTTTGTTC ATGAAATGAA AATGAGTTAT 
GAGCTGCTCA ATGAAGGGCG TAAGCTGCTT GGGCAGCCAG CGGAAGATTT TGACGAGGAA 
AAGTATCGGT TAGTGCAGCA GCGGTTATTA ACCGAAATTG ACATCCGCAT AGAGAATCAG 
TTGGTTGATT TTCCGCTTGC TTTCGTTGCC CAACTAAACT TGAGTGACCT GGCGTTACTC 
CCGGGGTTTG ATCCACTGCT TCCCAGGCGG GGGTTATTGA GCTTCTTTGT CGATGTTACC 
TGGGAAGATC GGCAGCCCTT TGTTTTCTGG CACGATGTTG AGGTAGATAC ATTAAGCACG 
CTAGCTGTGC CAGATGACTT GCTGGCTTTT TACAATAAGA TTGAATTTCG TGAACCATGG 
CAATTGTGTA CACAGGTTGA GTGCCTGGAA CCTCTTTCCG TTATCAGTGT TTCGTCAGTC 
TGCGAGGGGT TAAGCGTTAC GCAGCAGAAA GCGTATGAAT CATGGTATGA CGCGTTAAGT 
GATTACGAAC AGGACAACCC GTATCGAGTT GATGCCTGCT ATTCCGGCGC TCTTCTGGGA 
GGGTGGACAA TTCCTCTCCA ACGTAGTGTG GAAGATGAAC TGAATCAAAA TGATACAAGG 
TGGCGACAGC TTTTTAGCTG GGATGAAGAA ATTCATTCTA CAACAGCATT ACTGGCTGTC 
GCTGGGCCGG ATTTTGGCGG GGGCATTGAC TATATAATGA TGACTGAAAA AGACATGGCT 
GCACAATGCT TTGACAGGGT GCGAAATGTT GTCCAGTTAG ATTAA
 
Protein sequence
MSLFFDRAGL IAELRKSNLS SAIQEKVVQQ ARAAIAFKRC LRDMETVKVG ASRLGGLPDW 
PLGQSWPIRK KSVNATSRVL KLKAEKTRNA RFVHEMKMSY ELLNEGRKLL GQPAEDFDEE 
KYRLVQQRLL TEIDIRIENQ LVDFPLAFVA QLNLSDLALL PGFDPLLPRR GLLSFFVDVT 
WEDRQPFVFW HDVEVDTLST LAVPDDLLAF YNKIEFREPW QLCTQVECLE PLSVISVSSV 
CEGLSVTQQK AYESWYDALS DYEQDNPYRV DACYSGALLG GWTIPLQRSV EDELNQNDTR 
WRQLFSWDEE IHSTTALLAV AGPDFGGGID YIMMTEKDMA AQCFDRVRNV VQLD