Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3534 |
Symbol | |
ID | 6482916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3425749 |
End bp | 3426756 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642738817 |
Product | hypothetical protein |
Protein accession | YP_002042536 |
Protein GI | 194442399 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 109 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGACA AAACTATTCC GTTCTCGGCG CTGGATCTGG CGCCGATCCC TGAAGGAGCT TCGGCAAAAG AAGCCTTCAC GCACTCGCTG GATCTCGCAC GGCTGGCTGA AAAGCGCGGT TATCACCGCT ACTGGCTGGC GGAACATCAC AACATGACCG GTATCGCCAG CGCGGCGACC TCGGTATTGA TTGGTTATCT GGCGGCCAAT ACCACAACAT TACATCTTGG CTCCGGCGGC GTGATGCTGC CTAACCATTC ACCGCTGGTG ATTGCCGAGC AGTTCGGCAC GCTGAATACG CTCTACCCGG GGCGTATCGA CTTAGGGTTG GGACGCGCGC CGGGTAGCGA TCAGCCGACG ATGCGCGCGC TACGTCGCCA TATGAGCGGC GATATCGATA ACTTTCCACG CGATGTCGCA GAGCTGGTGG ACTGGTTCGA CGCTCGCGAC CCTAATCCGC ATGTGCGCCC GGTGCCCGGC TACGGCGAGC AGGTCCCGGT CTGGCTGCTG GGCTCCAGCT TGTATAGCGC ACAGTTGGCG GCCCAGCTTG GCCTGCCGTT CGCCTTTGCT TCGCATTTCG CGCCGGATAT GTTGTTCCAG GCGCTGCATC TGTACCGTAC CCAGTTCAAA CCTTCAGCGC GGCTGGAAAA ACCGTACGCG ATGGTGTGTA TCAATATTAT CGCCGCCGAC AGCAACCGCG ACGCCGAATT CCTGTTTACC TCCATGCAGC AGGCTTTCGT GAAGCTACGC CGTGGGGAAA CCGGCCAACT GCCGCCGCCG ATTGAGAATA TGGAGACCTT CTGGTCGCCA TCCGAGCAGT ATGGCGTGCA GCAGGCGCTG AGTATGTCGC TGGTCGGTGA TAAAGCGAAA GTCCGCCACG GGCTGGAATC CATCCTGCGG GAGACCCAGG CGGATGAAAT TATGGTCAAC GGGCAGATTT TCGACCACCA GGCACGCCTG CATTCGTTTG ATTTGGCGAT GGATGTGAAG CAGGAATTGT TGGGGTAG
|
Protein sequence | MTDKTIPFSA LDLAPIPEGA SAKEAFTHSL DLARLAEKRG YHRYWLAEHH NMTGIASAAT SVLIGYLAAN TTTLHLGSGG VMLPNHSPLV IAEQFGTLNT LYPGRIDLGL GRAPGSDQPT MRALRRHMSG DIDNFPRDVA ELVDWFDARD PNPHVRPVPG YGEQVPVWLL GSSLYSAQLA AQLGLPFAFA SHFAPDMLFQ ALHLYRTQFK PSARLEKPYA MVCINIIAAD SNRDAEFLFT SMQQAFVKLR RGETGQLPPP IENMETFWSP SEQYGVQQAL SMSLVGDKAK VRHGLESILR ETQADEIMVN GQIFDHQARL HSFDLAMDVK QELLG
|
| |