Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3400 |
Symbol | hybC |
ID | 6484590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3298118 |
End bp | 3299821 |
Gene Length | 1704 bp |
Protein Length | 567 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642738691 |
Product | hydrogenase 2 large subunit |
Protein accession | YP_002042411 |
Protein GI | 194443001 |
COG category | [C] Energy production and conversion |
COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGA GAATTACTAT TGATCCGGTA ACCCGTATTG AGGGTCATTT ACGCATTGAC TGCGAAATTG AGAACGGCGT CGTATCCAAA GCATGGGCGT CCGGCACCAT GTGGCGCGGT ATGGAAGAGA TCGTGAAGAA CCGCGATCCG CGCGATGCGT GGATGATTGT GCAGCGTATT TGCGGCGTTT GTACGACAAC TCACGCGATC TCCTCCGTTC GTGCGGCGGA AAGCGCGCTG AATATTGATG TTCCCGTCAA CGCGCAGTAT ATCCGTAATA TTATTCTGGC GGCGCATACC ACCCATGACC ACATTGTCCA TTTCTACCAG CTCTCTGCGC TGGACTGGGT GGACATTACC TCTGCGCTGA AAGCCGATCC GGAAAAAGCT TCTGCGATGC TGGATGGCGT GTCGAGCTGG CACCTGAACA GCGCGCAAGA GTTCACGAAA GTTCAGAACA AGATCAAGGA TCTTGTCGCC AGCGGTCAGT TAGGTATTTT CGCCAACGGC TACTGGGGGC ACCCGGCAAT GCAGTTACCG CCGGAGGTCA ACCTGATTGC GGTCGCTCAC TATCTGCAGG CGCTGGAATG TCAGCGTGAC GCTAACCGCG TGGTGGCGTT GCTGGGCGGT AAATCGCCGC ATATCCAGAA CCTGGCGGTC GGTGGGGTGG CGAACCCGAT CAATCTCGAC AGCATCGGTA CGTTGAACCT TGAACGCCTG ATGTACATCA AATCGTTTAT CGATAAGCTG AGCGATTTTG TCGAGCAGGT GTATAAAGTG GATACCGCAG TCATCGCGGC CTACTATCCG GAATGGCTGG AGCGTGGCAA AGGCGCGGTG AACTACCTGA GCGCGCCGGA ATTCCCGACC GACGGTAAAA ACGGCAGTTT CCTGTTCCCG GGCGGTTACA TTACCAATGC CGATCTGTCG ACATACCGTC CGATCACCTC TCACTCCGAC GAATTCCTGA TTAAAGGTAT TCAGGAGAGC GCGAAGCACG CCTGGTACAA AGATGAAGCG CCGCAGGCGC CGTGGGAAGG CACTACGATC CCGGCTTACG ACGGTTGGTC GGATGACGGT AAATACTCAT GGGTCAAGTC GCCGACATTC TACGGCAAAA CCGTCGAAGT CGGGCCGCTG GCGAACATGC TGTGTAAACT GGCTGCAGGT CGTGAATCCA CGCAGACCAA GCTCAATGAA ATCATTGCGC TTTATCAGAA GCTGACCGGC AAAACGTTGG AAATGGCGCA ACTTCACTCT ACGCTGGGTC GTATCATCGG GCGTACCGTT CACTGTTGTG AACTGCAAAA CATATTGCAG GATCAATACA ACGCGCTGAT TGTAAATATC GGCAAAGGCG ATTACACCAC GTTTGTGAAG CCGAACATTC CGGCGACGGG CGAGTTCAAA GGCGTGGGCT TCCTGGAGGC GCCGCGCGGT ATGCTGTCTC ACTGGATGGT GATTAAAGAC GGTATTATCA GTAACTATCA GGCGGTGGTG CCATCGACCT GGAACTCAGG TCCGCGTAAC TTCAACGATG ACGTGGGGCC GTACGAACAG TCGCTGGTCG GTACGCCGAT CGCCGATCCG GCGAAGCCGC TGGAAGTGGT ACGTACCATC CACTCCTTCG ACCCTTGCAT GGCGTGCGCG GTACACGTGG TGGACGCCGA TGGCAATGAA GTGGTCTCGG TGAAGGTTTT GTAA
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Protein sequence | MSQRITIDPV TRIEGHLRID CEIENGVVSK AWASGTMWRG MEEIVKNRDP RDAWMIVQRI CGVCTTTHAI SSVRAAESAL NIDVPVNAQY IRNIILAAHT THDHIVHFYQ LSALDWVDIT SALKADPEKA SAMLDGVSSW HLNSAQEFTK VQNKIKDLVA SGQLGIFANG YWGHPAMQLP PEVNLIAVAH YLQALECQRD ANRVVALLGG KSPHIQNLAV GGVANPINLD SIGTLNLERL MYIKSFIDKL SDFVEQVYKV DTAVIAAYYP EWLERGKGAV NYLSAPEFPT DGKNGSFLFP GGYITNADLS TYRPITSHSD EFLIKGIQES AKHAWYKDEA PQAPWEGTTI PAYDGWSDDG KYSWVKSPTF YGKTVEVGPL ANMLCKLAAG RESTQTKLNE IIALYQKLTG KTLEMAQLHS TLGRIIGRTV HCCELQNILQ DQYNALIVNI GKGDYTTFVK PNIPATGEFK GVGFLEAPRG MLSHWMVIKD GIISNYQAVV PSTWNSGPRN FNDDVGPYEQ SLVGTPIADP AKPLEVVRTI HSFDPCMACA VHVVDADGNE VVSVKVL
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