| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A3351 |
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| Symbol | |
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| ID | 6482342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 3252447 |
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| End bp | 3253583 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642738642 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_002042363 |
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| Protein GI | 194443015 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 0.315269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAAC TACCGCCGCT CAGTCTTTAT ATTCATATTC CCTGGTGTGT ACAAAAATGT
CCATATTGCG ACTTCAATTC CCATGCGTTG AAGGGCGAGG TGCCGCATGA CGACTACGTC
CAGCATCTGT TAAGAGATCT GGACGCCGAT GTTGCCTGGG CGCAAGGGCG TGAAGTAAAG
ACCATTTTTA TTGGCGGCGG TACGCCAAGC CTGCTTTCCG GGCCGGCGAT GCAAACGCTG
CTGGACGGCG TGCGCGCGCG CCTGAATCTG GCGGCGGATG CGGAAATTAC CATGGAAGCG
AACCCCGGCA CGGTCGAAAC CGACCGCTTC ATCGACTATC AGCGCGCCGG CGTAAACCGG
ATCTCCATTG GCGTGCAGAG CTTTAGTGAG CCTAAGCTGA AACGCCTTGG CCGTATTCAC
GGTCCACAAG AGGCGATGCG GGCAGCAAGA CTGGCAAATG GGCTTGGGCT ACGCAGCTTT
AACCTCGACT TGATGCATGG ATTGCCGGAC CAAACGCTGG AAGAGGCGCT GAACGATTTG
CGACAGGCGA TTGCGCTTAA TCCGCCGCAT CTCTCATGGT ATCAATTGAC GATTGAACCC
AACACTTTGT TCGGTTCGCG TCCGCCGGTT TTACCGGACG ATGACGCACT GTGGGATATC
TTTGAGCAGG GCCACCAGTT ATTAACCGCT GCTGGCTATC AGCAATACGA AACGTCGGCC
TATGCCAAAC CCGGTTATCA GTGCCAGCAT AATCTGAACT ACTGGCGCTT TGGCGACTAT
CTGGGGATTG GCTGCGGCGC CCACGGTAAA GTCACTTTCC CGGGCGGCAG GATCCTGCGC
ACCACCAAAA CCCGTCACCC ACGCGGTTAT ATGCAGGGAC GTTACCTGGA AAGCCAGCGT
GACGTGAGTG ATGACGATAA ACCCTTTGAG TTCTTTATGA ATCGTTTTCG GTTGCTGGAG
CGCGCGCCTC GCGCCGAATT TGTCGCCTAT ACCGGGCTTA CGGAAGCGGT TATTCGTCAG
CCAATCGACG AGGCTATTGC CCAGGGCTAC CTGACCGAAT GCGAGCAATA CTGGCAGATT
ACCCGGCACG GTAAACTGTT TTTAAACTCT CTTCTTGAGT TGTTTCTCGC GGAATAA
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| Protein sequence | MAKLPPLSLY IHIPWCVQKC PYCDFNSHAL KGEVPHDDYV QHLLRDLDAD VAWAQGREVK
TIFIGGGTPS LLSGPAMQTL LDGVRARLNL AADAEITMEA NPGTVETDRF IDYQRAGVNR
ISIGVQSFSE PKLKRLGRIH GPQEAMRAAR LANGLGLRSF NLDLMHGLPD QTLEEALNDL
RQAIALNPPH LSWYQLTIEP NTLFGSRPPV LPDDDALWDI FEQGHQLLTA AGYQQYETSA
YAKPGYQCQH NLNYWRFGDY LGIGCGAHGK VTFPGGRILR TTKTRHPRGY MQGRYLESQR
DVSDDDKPFE FFMNRFRLLE RAPRAEFVAY TGLTEAVIRQ PIDEAIAQGY LTECEQYWQI
TRHGKLFLNS LLELFLAE
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