Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3341 |
Symbol | |
ID | 6486760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 3245472 |
End bp | 3246251 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642738632 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_002042353 |
Protein GI | 194442934 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0620938 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 0.265707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCTGGA TAGCCAAACG CCGGGGCCAT GACGCGGATT TTTTTATTAT GCGTATTCCC CGCATTTATC ACCCTGAATT GTTGACGTCC GGTACGCAGA TTTCGTTATG CGAAGATGCG GCCAACCATA TTGGTCGTGT ACTGCGCATG GGACCGGGAC AAGCGTTACA GCTGTTTGAC GGCAGTAATC AGGTATTCGA TGCTGAAATC ATTAGCGCCA GTAAGAAAAG CGTTGAAGTG CAAGTGATGA AAGGCGAAAT CGACGATCGT GAATCGCCGC TGCATATCCA TCTGGGCCAG GTGATGTCGC GCGGTGAAAA AATGGAATTT ACTATCCAGA AATCGATCGA ACTGGGTGTA AGCCTCATTA CGCCACTGTT CTCTGAGCGC TGCGGCGTTA AACTGGATAA TGAACGTCTG AACAAAAAGC GCCAGCAGTG GCAGAAGATC GCCATCGCCG CCTGCGAACA ATGCGGGCGT AACCGGGTGC CGGAAATTCG CCCGCCGATG GCGCTGGAAG CCTGGTGCGC CGAGCAAGAT TCCGGGCTGA AGCTCAATCT TCATCCGCGC GCCCATGCCA GCATCAACAC TCTGCCGCTG CCGGTTGAAC GCGTCCGACT GCTGATCGGC CCGGAAGGCG GGCTGTCGGC GGACGAAATC GCGATGACCG CGCGCTATCA GTTTACTGAT ATTCTGTTAG GACCTCGCGT TCTGCGTACT GAGACAACCG CGCTCACCGC CATTACCGCG CTACAGGTGC GTTTTGGCGA CTTAGGATGA
|
Protein sequence | MPWIAKRRGH DADFFIMRIP RIYHPELLTS GTQISLCEDA ANHIGRVLRM GPGQALQLFD GSNQVFDAEI ISASKKSVEV QVMKGEIDDR ESPLHIHLGQ VMSRGEKMEF TIQKSIELGV SLITPLFSER CGVKLDNERL NKKRQQWQKI AIAACEQCGR NRVPEIRPPM ALEAWCAEQD SGLKLNLHPR AHASINTLPL PVERVRLLIG PEGGLSADEI AMTARYQFTD ILLGPRVLRT ETTALTAITA LQVRFGDLG
|
| |