Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3307 |
Symbol | |
ID | 6485353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 3211956 |
End bp | 3212816 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642738600 |
Product | mechanosensitive channel MscS |
Protein accession | YP_002042321 |
Protein GI | 194442396 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGATT TGAATGTTGT CGACAGCATA AATGGTGCGG GCACCTGGCT GGTACGCAAC CAGGCGTTAT TGCTCAGCTA TGCTGTGAAT ATTGTTGCGG CTATCGCTAT TATCATCATC GGCTTGATTG TAGCGCGCGT GATTTCCAAT ACGGTAAATC GTCTGATGCG TGCGCGTCAT ATTGATGCGA CAGTGGCCGA CTTTCTTTCT GCGCTGGTGC GCTATGGGGT TATCGCTTTT ACGCTGATTG CGGCTCTGGG TCGCGTGGGG GTTCAAACCG CCTCGGTTAT TGCCGTACTG GGCGCCGCTG GTTTAGCCGT TGGCCTGGCA TTACAGGGAT CGCTTTCTAA CCTTGCGGCT GGGGTATTGC TGGTTATGTT CCGTCCGTTC CGCGCCGGTG AGTATGTCGA TTTGGGCGGC GTTGCCGGTA CGGTACTTAA CGTGCAAATC TTTTCCACGA CAATGCGCGC GGTAGACGGC AAAATTATTG TGATTCCGAA TGGCAAAATT ATCGCGGGAA ATATCATCAA CTATTCTCGT GAGCCGGTTC GCCGTAACGA ATTCATTATT GGGGTGGCCT ACGATTCGGA TATCGATCAG GTGAAACAGT TGCTCACGAC GATTATCGAG TCCGACGATC GTATTTTAAA AGATCGCGAA ATGACGGTGC GTTTGAATGA GCTGGGCGCC TCATCGATTA ATTTTGTGGT GCGTGTCTGG AGTAAAAGCA GCGACCTGCA AAATGTCTAC TGGGACGTGC TGGAACGTAT TAAACGTGAA TTCGACGCAG CTGGTATTAG CTTCCCGTAC CCGCAGATGG ACGTCAATTT TAAACGCGTG AAAGATAACG CCGCGGAGTA A
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Protein sequence | MEDLNVVDSI NGAGTWLVRN QALLLSYAVN IVAAIAIIII GLIVARVISN TVNRLMRARH IDATVADFLS ALVRYGVIAF TLIAALGRVG VQTASVIAVL GAAGLAVGLA LQGSLSNLAA GVLLVMFRPF RAGEYVDLGG VAGTVLNVQI FSTTMRAVDG KIIVIPNGKI IAGNIINYSR EPVRRNEFII GVAYDSDIDQ VKQLLTTIIE SDDRILKDRE MTVRLNELGA SSINFVVRVW SKSSDLQNVY WDVLERIKRE FDAAGISFPY PQMDVNFKRV KDNAAE
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